Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1461045 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1279404 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 30386877 ~ 30387089 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1461036 | lncRNA | upstream | 12608 | 30374027 ~ 30374269 (+) | True | G1279395 |
| TU1461020 | lncRNA | upstream | 33981 | 30350492 ~ 30352896 (+) | True | G1279379 |
| TU1460984 | lncRNA | upstream | 83997 | 30302672 ~ 30302880 (+) | True | G1279348 |
| TU1460109 | lncRNA | upstream | 272641 | 30112319 ~ 30114236 (+) | True | G1278514 |
| TU1460060 | lncRNA | upstream | 316884 | 30056501 ~ 30069993 (+) | True | G1278468 |
| TU1461102 | lncRNA | downstream | 8124 | 30395213 ~ 30395447 (+) | True | G1279449 |
| TU1461113 | lncRNA | downstream | 24277 | 30411366 ~ 30411598 (+) | True | G1279459 |
| TU1461104 | lncRNA | downstream | 27624 | 30414713 ~ 30416294 (+) | True | htr5ab |
| TU1461152 | lncRNA | downstream | 46100 | 30433189 ~ 30433524 (+) | True | G1279498 |
| TU1461155 | lncRNA | downstream | 46795 | 30433884 ~ 30434118 (+) | True | G1279501 |
| XM_021563017.2 | mRNA | upstream | 41311 | 30329810 ~ 30345566 (+) | False | LOC110489977 |
| XM_021563018.2 | mRNA | upstream | 41311 | 30329810 ~ 30345566 (+) | True | LOC110489977 |
| XM_021563014.2 | mRNA | upstream | 410791 | 29969944 ~ 29976086 (+) | True | tgif1 |
| XM_021563008.2 | mRNA | upstream | 690926 | 29689717 ~ 29695951 (+) | True | LOC110489968 |
| XM_021563004.2 | mRNA | upstream | 721956 | 29657968 ~ 29664921 (+) | True | ackr4b |
| XM_021563020.2 | mRNA | downstream | 8728 | 30395817 ~ 30416375 (+) | False | htr5ab |
| XM_021563021.2 | mRNA | downstream | 8728 | 30395817 ~ 30416375 (+) | False | htr5ab |
| XM_021563023.2 | mRNA | downstream | 94928 | 30482017 ~ 30496207 (+) | True | insig1 |
| XM_021563022.2 | mRNA | downstream | 130907 | 30517996 ~ 30521339 (+) | True | en2a |
| XR_005036352.1 | mRNA | downstream | 146007 | 30533096 ~ 30533257 (+) | True | LOC118938958 |
| TU1460985 | other | upstream | 83458 | 30303033 ~ 30303419 (+) | True | G1279349 |
| TU1458797 | other | upstream | 1571067 | 28815366 ~ 28815810 (+) | True | G1277279 |
| TU1458658 | other | upstream | 1762659 | 28574316 ~ 28624218 (+) | False | G1277159 |
| TU1458659 | other | upstream | 1762659 | 28574316 ~ 28624218 (+) | True | G1277159 |
| TU1458201 | other | upstream | 2130471 | 28190186 ~ 28256406 (+) | True | G1276733 |
| TU1461105 | other | downstream | 8778 | 30395867 ~ 30408017 (+) | False | htr5ab |
| TU1461526 | other | downstream | 557082 | 30944171 ~ 30947330 (+) | True | G1279833 |
| TU1463280 | other | downstream | 1609078 | 31996167 ~ 31996513 (+) | True | G1281462 |
| TU1464164 | other | downstream | 2300469 | 32687558 ~ 32698036 (+) | False | G1282302 |
| TU1466288 | other | downstream | 3724718 | 34111807 ~ 34112271 (+) | True | G1284354 |
