Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1461152 |
| length | 336 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1279498 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 30433189 ~ 30433524 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1461104 | lncRNA | upstream | 16895 | 30414713 ~ 30416294 (+) | True | htr5ab |
| TU1461113 | lncRNA | upstream | 21591 | 30411366 ~ 30411598 (+) | True | G1279459 |
| TU1461102 | lncRNA | upstream | 37742 | 30395213 ~ 30395447 (+) | True | G1279449 |
| TU1461045 | lncRNA | upstream | 46100 | 30386877 ~ 30387089 (+) | True | G1279404 |
| TU1461036 | lncRNA | upstream | 58920 | 30374027 ~ 30374269 (+) | True | G1279395 |
| TU1461155 | lncRNA | downstream | 360 | 30433884 ~ 30434118 (+) | True | G1279501 |
| TU1461158 | lncRNA | downstream | 1148 | 30434672 ~ 30434922 (+) | True | G1279504 |
| TU1461171 | lncRNA | downstream | 9960 | 30443484 ~ 30443712 (+) | True | G1279517 |
| TU1461174 | lncRNA | downstream | 13353 | 30446877 ~ 30447153 (+) | True | G1279520 |
| TU1461179 | lncRNA | downstream | 22339 | 30455863 ~ 30456064 (+) | True | G1279525 |
| XM_021563020.2 | mRNA | upstream | 16814 | 30395817 ~ 30416375 (+) | False | htr5ab |
| XM_021563021.2 | mRNA | upstream | 16814 | 30395817 ~ 30416375 (+) | False | htr5ab |
| XM_021563017.2 | mRNA | upstream | 87623 | 30329810 ~ 30345566 (+) | False | LOC110489977 |
| XM_021563018.2 | mRNA | upstream | 87623 | 30329810 ~ 30345566 (+) | True | LOC110489977 |
| XM_021563014.2 | mRNA | upstream | 457103 | 29969944 ~ 29976086 (+) | True | tgif1 |
| XM_021563023.2 | mRNA | downstream | 48493 | 30482017 ~ 30496207 (+) | True | insig1 |
| XM_021563022.2 | mRNA | downstream | 84472 | 30517996 ~ 30521339 (+) | True | en2a |
| XR_005036352.1 | mRNA | downstream | 99572 | 30533096 ~ 30533257 (+) | True | LOC118938958 |
| XM_021563024.2 | mRNA | downstream | 121547 | 30555071 ~ 30601062 (+) | False | rbm33a |
| XM_021563026.2 | mRNA | downstream | 121547 | 30555071 ~ 30601062 (+) | False | rbm33a |
| TU1461105 | other | upstream | 25172 | 30395867 ~ 30408017 (+) | False | htr5ab |
| TU1460985 | other | upstream | 129770 | 30303033 ~ 30303419 (+) | True | G1279349 |
| TU1458797 | other | upstream | 1617379 | 28815366 ~ 28815810 (+) | True | G1277279 |
| TU1458658 | other | upstream | 1808971 | 28574316 ~ 28624218 (+) | False | G1277159 |
| TU1461526 | other | downstream | 510647 | 30944171 ~ 30947330 (+) | True | G1279833 |
| TU1463280 | other | downstream | 1562643 | 31996167 ~ 31996513 (+) | True | G1281462 |
| TU1464164 | other | downstream | 2254034 | 32687558 ~ 32698036 (+) | False | G1282302 |
| TU1466288 | other | downstream | 3678283 | 34111807 ~ 34112271 (+) | True | G1284354 |
| TU1468667 | other | downstream | 5602059 | 36035583 ~ 36093396 (+) | False | G1286648 |
