Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1471869 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1289678 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 38477165 ~ 38477380 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1471867 | lncRNA | upstream | 924 | 38475858 ~ 38476241 (+) | True | G1289676 |
| TU1471690 | lncRNA | upstream | 281065 | 38195782 ~ 38196100 (+) | True | G1289500 |
| TU1471687 | lncRNA | upstream | 283531 | 38193338 ~ 38193634 (+) | True | G1289497 |
| TU1471679 | lncRNA | upstream | 294840 | 38181735 ~ 38182325 (+) | True | G1289489 |
| TU1471677 | lncRNA | upstream | 297037 | 38179828 ~ 38180128 (+) | True | G1289487 |
| TU1471857 | lncRNA | downstream | 87369 | 38564749 ~ 38568471 (+) | True | LOC110490038 |
| TU1471887 | lncRNA | downstream | 92966 | 38570346 ~ 38570624 (+) | True | G1289696 |
| TU1471896 | lncRNA | downstream | 107134 | 38584514 ~ 38585337 (+) | False | G1289700 |
| TU1471898 | lncRNA | downstream | 107134 | 38584514 ~ 38585455 (+) | True | G1289700 |
| TU1471905 | lncRNA | downstream | 115112 | 38592492 ~ 38592692 (+) | True | G1289707 |
| XM_021563130.2 | mRNA | upstream | 439140 | 38018211 ~ 38038025 (+) | True | LOC110490034 |
| XM_021563126.2 | mRNA | upstream | 459177 | 37974722 ~ 38017988 (+) | False | LOC110490033 |
| XM_021563128.2 | mRNA | upstream | 459177 | 37974722 ~ 38017988 (+) | True | LOC110490033 |
| XM_036944328.1 | mRNA | upstream | 516572 | 37848784 ~ 37960593 (+) | False | nrp1a |
| XM_021563136.2 | mRNA | downstream | 16909 | 38494289 ~ 38568479 (+) | False | LOC110490038 |
| XM_021563135.2 | mRNA | downstream | 16911 | 38494291 ~ 38568479 (+) | False | LOC110490038 |
| XM_036944343.1 | mRNA | downstream | 99255 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_036944344.1 | mRNA | downstream | 99255 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_036944345.1 | mRNA | downstream | 99255 | 38576635 ~ 38580756 (+) | True | LOC110490039 |
| TU1471681 | other | upstream | 293162 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1469571 | other | upstream | 1966653 | 36509078 ~ 36510512 (+) | True | G1287489 |
| TU1468667 | other | upstream | 2383769 | 36035583 ~ 36093396 (+) | False | G1286648 |
| TU1466288 | other | upstream | 4364894 | 34111807 ~ 34112271 (+) | True | G1284354 |
| TU1464164 | other | upstream | 5779129 | 32687558 ~ 32698036 (+) | False | G1282302 |
| TU1471908 | other | downstream | 117500 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | downstream | 117500 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1472790 | other | downstream | 559625 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1472866 | other | downstream | 648892 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1473879 | other | downstream | 1590178 | 40067558 ~ 40067907 (+) | True | G1291464 |
