Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472081 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G1289875 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 38840771 ~ 38840986 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472060 | lncRNA | upstream | 31060 | 38804632 ~ 38809711 (+) | False | G1289855 |
| TU1472061 | lncRNA | upstream | 31060 | 38804632 ~ 38809711 (+) | True | G1289855 |
| TU1471939 | lncRNA | upstream | 210116 | 38630426 ~ 38630655 (+) | True | G1289740 |
| TU1471906 | lncRNA | upstream | 247197 | 38593363 ~ 38593574 (+) | True | G1289708 |
| TU1471905 | lncRNA | upstream | 248079 | 38592492 ~ 38592692 (+) | True | G1289707 |
| TU1472117 | lncRNA | downstream | 43698 | 38884684 ~ 38884898 (+) | True | G1289910 |
| TU1472119 | lncRNA | downstream | 45741 | 38886727 ~ 38886952 (+) | True | G1289912 |
| TU1472127 | lncRNA | downstream | 57765 | 38898751 ~ 38899051 (+) | True | G1289920 |
| TU1472135 | lncRNA | downstream | 75081 | 38916067 ~ 38916455 (+) | True | G1289928 |
| TU1472136 | lncRNA | downstream | 76257 | 38917243 ~ 38917553 (+) | True | G1289929 |
| XM_036944343.1 | mRNA | upstream | 260015 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_036944344.1 | mRNA | upstream | 260015 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_036944345.1 | mRNA | upstream | 260015 | 38576635 ~ 38580756 (+) | True | LOC110490039 |
| XM_021563136.2 | mRNA | upstream | 272292 | 38494289 ~ 38568479 (+) | False | LOC110490038 |
| LOC110490723 | mRNA | downstream | 14264 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_021564185.2 | mRNA | downstream | 241828 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| XM_036945535.1 | mRNA | downstream | 247087 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021563144.2 | mRNA | downstream | 706358 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 714883 | 39555869 ~ 39589108 (+) | False | brca2 |
| TU1471908 | other | upstream | 240530 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 240530 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 656768 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1469571 | other | upstream | 2330259 | 36509078 ~ 36510512 (+) | True | G1287489 |
| TU1468667 | other | upstream | 2747375 | 36035583 ~ 36093396 (+) | False | G1286648 |
| TU1472790 | other | downstream | 196019 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1472866 | other | downstream | 285286 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1473879 | other | downstream | 1226572 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 1279283 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2742387 | 41583373 ~ 41588144 (+) | False | G1293072 |
