Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472752 |
| length | 252 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1290518 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 38957945 ~ 38958196 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472743 | lncRNA | upstream | 10600 | 38947112 ~ 38947345 (+) | True | G1290509 |
| TU1472725 | lncRNA | upstream | 21657 | 38936085 ~ 38936288 (+) | True | G1290491 |
| TU1472722 | lncRNA | upstream | 23730 | 38933767 ~ 38934215 (+) | True | G1290488 |
| TU1472721 | lncRNA | upstream | 24499 | 38933241 ~ 38933446 (+) | True | G1290487 |
| TU1472712 | lncRNA | upstream | 32032 | 38925711 ~ 38925913 (+) | True | G1290478 |
| TU1472754 | lncRNA | downstream | 2572 | 38960768 ~ 38961267 (+) | True | G1290520 |
| TU1472755 | lncRNA | downstream | 5488 | 38963684 ~ 38963925 (+) | True | G1290521 |
| TU1472756 | lncRNA | downstream | 6699 | 38964895 ~ 38965109 (+) | True | G1290522 |
| TU1472757 | lncRNA | downstream | 7054 | 38965250 ~ 38965697 (+) | True | G1290523 |
| TU1472760 | lncRNA | downstream | 8922 | 38967118 ~ 38967525 (+) | True | G1290526 |
| LOC110490723 | mRNA | upstream | 101837 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944343.1 | mRNA | upstream | 377189 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_036944344.1 | mRNA | upstream | 377189 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_036944345.1 | mRNA | upstream | 377189 | 38576635 ~ 38580756 (+) | True | LOC110490039 |
| XM_021563135.2 | mRNA | upstream | 389466 | 38494291 ~ 38568479 (+) | False | LOC110490038 |
| XM_021564185.2 | mRNA | downstream | 124618 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| XM_036945535.1 | mRNA | downstream | 129877 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021563144.2 | mRNA | downstream | 589148 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 597673 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 597697 | 39555893 ~ 39589108 (+) | False | brca2 |
| TU1471908 | other | upstream | 357704 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 357704 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 773942 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1469571 | other | upstream | 2447433 | 36509078 ~ 36510512 (+) | True | G1287489 |
| TU1468667 | other | upstream | 2864549 | 36035583 ~ 36093396 (+) | False | G1286648 |
| TU1472790 | other | downstream | 78809 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1472866 | other | downstream | 168076 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1473879 | other | downstream | 1109362 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 1162073 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2625177 | 41583373 ~ 41588144 (+) | False | G1293072 |
