Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472865 |
| length | 393 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1290613 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39122681 ~ 39123073 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472842 | lncRNA | upstream | 34346 | 39086859 ~ 39088335 (+) | False | LOC110490841 |
| TU1472843 | lncRNA | upstream | 34457 | 39086859 ~ 39088224 (+) | True | LOC110490841 |
| TU1472788 | lncRNA | upstream | 61433 | 39037427 ~ 39061248 (+) | True | G1290549 |
| TU1472791 | lncRNA | upstream | 89261 | 39027242 ~ 39033420 (+) | False | G1290550 |
| TU1472807 | lncRNA | upstream | 92051 | 39024349 ~ 39030630 (+) | False | G1290559 |
| TU1472877 | lncRNA | downstream | 13718 | 39136791 ~ 39166202 (+) | True | G1290619 |
| TU1472908 | lncRNA | downstream | 58163 | 39181236 ~ 39184267 (+) | True | G1290623 |
| TU1472909 | lncRNA | downstream | 63389 | 39186462 ~ 39221901 (+) | False | G1290624 |
| TU1472912 | lncRNA | downstream | 63389 | 39186462 ~ 39224019 (+) | False | G1290624 |
| TU1472885 | lncRNA | downstream | 65113 | 39188186 ~ 39234498 (+) | False | G1290620 |
| XM_036945535.1 | mRNA | upstream | 33045 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021564185.2 | mRNA | upstream | 37981 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| LOC110490723 | mRNA | upstream | 266573 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944343.1 | mRNA | upstream | 541925 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_021563144.2 | mRNA | downstream | 424271 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 432796 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 432820 | 39555893 ~ 39589108 (+) | False | brca2 |
| XM_021563145.2 | mRNA | downstream | 433120 | 39556193 ~ 39589108 (+) | False | brca2 |
| XM_021563148.2 | mRNA | downstream | 433120 | 39556193 ~ 39589108 (+) | False | brca2 |
| TU1472790 | other | upstream | 85022 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471908 | other | upstream | 522440 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 522440 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 938678 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1469571 | other | upstream | 2612169 | 36509078 ~ 36510512 (+) | True | G1287489 |
| TU1472866 | other | downstream | 3199 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1473879 | other | downstream | 944485 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 997196 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2460300 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 2460300 | 41583373 ~ 41588087 (+) | True | G1293072 |
