Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472886 |
| length | 412 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G1290620 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39188186 ~ 39279823 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472908 | lncRNA | upstream | 3919 | 39181236 ~ 39184267 (+) | True | G1290623 |
| TU1472877 | lncRNA | upstream | 21984 | 39136791 ~ 39166202 (+) | True | G1290619 |
| TU1472865 | lncRNA | upstream | 65113 | 39122681 ~ 39123073 (+) | True | G1290613 |
| TU1472842 | lncRNA | upstream | 99851 | 39086859 ~ 39088335 (+) | False | LOC110490841 |
| TU1472910 | lncRNA | downstream | 1743 | 39222557 ~ 39224019 (+) | True | G1290624 |
| TU1472884 | lncRNA | downstream | 11183 | 39231997 ~ 39238311 (+) | False | G1290620 |
| TU1472888 | lncRNA | downstream | 11183 | 39231997 ~ 39234498 (+) | False | G1290620 |
| TU1472901 | lncRNA | downstream | 11183 | 39231997 ~ 39233454 (+) | False | G1290620 |
| TU1472903 | lncRNA | downstream | 20289 | 39241103 ~ 39292547 (+) | True | G1290621 |
| XM_036945535.1 | mRNA | upstream | 98550 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021564185.2 | mRNA | upstream | 103486 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| LOC110490723 | mRNA | upstream | 332078 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944344.1 | mRNA | upstream | 607430 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_021563144.2 | mRNA | downstream | 326530 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 335055 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 335079 | 39555893 ~ 39589108 (+) | False | brca2 |
| XM_021563145.2 | mRNA | downstream | 335379 | 39556193 ~ 39589108 (+) | False | brca2 |
| XM_021563148.2 | mRNA | downstream | 335379 | 39556193 ~ 39589108 (+) | False | brca2 |
| TU1472866 | other | upstream | 61177 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1472790 | other | upstream | 150527 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471908 | other | upstream | 587945 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 587945 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 1004183 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1473879 | other | downstream | 846744 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 899455 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2362559 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 2362559 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1475855 | other | downstream | 2688220 | 41909034 ~ 41909611 (+) | True | G1293295 |
