Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472901 |
| length | 404 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1290620 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39188186 ~ 39279823 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472912 | lncRNA | upstream | 7978 | 39186462 ~ 39224019 (+) | False | G1290624 |
| TU1472910 | lncRNA | upstream | 7978 | 39222557 ~ 39224019 (+) | True | G1290624 |
| TU1472909 | lncRNA | upstream | 10096 | 39186462 ~ 39221901 (+) | False | G1290624 |
| TU1472886 | lncRNA | upstream | 11183 | 39188186 ~ 39220814 (+) | False | G1290620 |
| TU1472924 | lncRNA | upstream | 19207 | 39189482 ~ 39212790 (+) | False | G1290636 |
| TU1472903 | lncRNA | downstream | 7649 | 39241103 ~ 39292547 (+) | True | G1290621 |
| TU1472915 | lncRNA | downstream | 8707 | 39242161 ~ 39262660 (+) | True | G1290627 |
| TU1472898 | lncRNA | downstream | 19273 | 39252727 ~ 39261051 (+) | False | G1290620 |
| TU1472893 | lncRNA | downstream | 26001 | 39259455 ~ 39279823 (+) | False | G1290620 |
| TU1472889 | lncRNA | downstream | 28112 | 39261566 ~ 39269811 (+) | False | G1290620 |
| XM_036945535.1 | mRNA | upstream | 142361 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021564185.2 | mRNA | upstream | 147297 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| LOC110490723 | mRNA | upstream | 375889 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944344.1 | mRNA | upstream | 651241 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_021563144.2 | mRNA | downstream | 313890 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 322415 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 322439 | 39555893 ~ 39589108 (+) | False | brca2 |
| XM_021563145.2 | mRNA | downstream | 322739 | 39556193 ~ 39589108 (+) | False | brca2 |
| XM_021563148.2 | mRNA | downstream | 322739 | 39556193 ~ 39589108 (+) | False | brca2 |
| TU1472866 | other | upstream | 104988 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1472790 | other | upstream | 194338 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471908 | other | upstream | 631756 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 631756 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 1047994 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1473879 | other | downstream | 834104 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 886815 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2349919 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 2349919 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1475855 | other | downstream | 2675580 | 41909034 ~ 41909611 (+) | True | G1293295 |
