Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472889 |
| length | 838 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G1290620 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39188186 ~ 39279823 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472898 | lncRNA | upstream | 515 | 39252727 ~ 39261051 (+) | False | G1290620 |
| TU1472884 | lncRNA | upstream | 23255 | 39231997 ~ 39238311 (+) | False | G1290620 |
| TU1472888 | lncRNA | upstream | 27068 | 39231997 ~ 39234498 (+) | False | G1290620 |
| TU1472901 | lncRNA | upstream | 28112 | 39231997 ~ 39233454 (+) | False | G1290620 |
| TU1472910 | lncRNA | upstream | 37547 | 39222557 ~ 39224019 (+) | True | G1290624 |
| TU1472906 | lncRNA | downstream | 26482 | 39296293 ~ 39301777 (+) | True | G1290622 |
| TU1472958 | lncRNA | downstream | 32634 | 39302445 ~ 39342176 (+) | False | G1290653 |
| TU1472959 | lncRNA | downstream | 32634 | 39302445 ~ 39356290 (+) | False | G1290653 |
| TU1472965 | lncRNA | downstream | 45319 | 39315130 ~ 39333444 (+) | True | G1290654 |
| TU1472962 | lncRNA | downstream | 46869 | 39316680 ~ 39367387 (+) | False | G1290653 |
| XM_036945535.1 | mRNA | upstream | 171930 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021564185.2 | mRNA | upstream | 176866 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| LOC110490723 | mRNA | upstream | 405458 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944344.1 | mRNA | upstream | 680810 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_021563144.2 | mRNA | downstream | 277533 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 286058 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 286082 | 39555893 ~ 39589108 (+) | False | brca2 |
| XM_021563145.2 | mRNA | downstream | 286382 | 39556193 ~ 39589108 (+) | False | brca2 |
| XM_021563148.2 | mRNA | downstream | 286382 | 39556193 ~ 39589108 (+) | False | brca2 |
| TU1472866 | other | upstream | 134557 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1472790 | other | upstream | 223907 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471908 | other | upstream | 661325 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 661325 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 1077563 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1473879 | other | downstream | 797747 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 850458 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2313562 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 2313562 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1475855 | other | downstream | 2639223 | 41909034 ~ 41909611 (+) | True | G1293295 |
