Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1472915 |
| length | 409 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1290627 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39242161 ~ 39262660 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1472884 | lncRNA | upstream | 3850 | 39231997 ~ 39238311 (+) | False | G1290620 |
| TU1472888 | lncRNA | upstream | 7663 | 39231997 ~ 39234498 (+) | False | G1290620 |
| TU1472901 | lncRNA | upstream | 8707 | 39231997 ~ 39233454 (+) | False | G1290620 |
| TU1472910 | lncRNA | upstream | 18142 | 39222557 ~ 39224019 (+) | True | G1290624 |
| TU1472932 | lncRNA | upstream | 29371 | 39200921 ~ 39212790 (+) | False | G1290636 |
| TU1472900 | lncRNA | downstream | 1488 | 39264148 ~ 39266844 (+) | True | G1290620 |
| TU1472906 | lncRNA | downstream | 33633 | 39296293 ~ 39301777 (+) | True | G1290622 |
| TU1472958 | lncRNA | downstream | 39785 | 39302445 ~ 39342176 (+) | False | G1290653 |
| TU1472959 | lncRNA | downstream | 39785 | 39302445 ~ 39356290 (+) | False | G1290653 |
| TU1472965 | lncRNA | downstream | 52470 | 39315130 ~ 39333444 (+) | True | G1290654 |
| XM_036945535.1 | mRNA | upstream | 152525 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021564185.2 | mRNA | upstream | 157461 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| LOC110490723 | mRNA | upstream | 386053 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944344.1 | mRNA | upstream | 661405 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_021563144.2 | mRNA | downstream | 284684 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 293209 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 293233 | 39555893 ~ 39589108 (+) | False | brca2 |
| XM_021563145.2 | mRNA | downstream | 293533 | 39556193 ~ 39589108 (+) | False | brca2 |
| XM_021563148.2 | mRNA | downstream | 293533 | 39556193 ~ 39589108 (+) | False | brca2 |
| TU1472866 | other | upstream | 115152 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1472790 | other | upstream | 204502 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471908 | other | upstream | 641920 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 641920 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 1058158 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1473879 | other | downstream | 804898 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 857609 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2320713 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 2320713 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1475855 | other | downstream | 2646374 | 41909034 ~ 41909611 (+) | True | G1293295 |
