Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1473037 |
| length | 360 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1290718 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39544178 ~ 39544537 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1473036 | lncRNA | upstream | 2997 | 39540900 ~ 39541181 (+) | True | G1290717 |
| TU1473033 | lncRNA | upstream | 6915 | 39514475 ~ 39537263 (+) | True | G1290715 |
| TU1472995 | lncRNA | upstream | 46026 | 39429526 ~ 39498152 (+) | True | G1290678 |
| TU1472990 | lncRNA | upstream | 114721 | 39379148 ~ 39429457 (+) | True | G1290675 |
| TU1472962 | lncRNA | upstream | 176791 | 39316680 ~ 39367387 (+) | False | G1290653 |
| TU1473038 | lncRNA | downstream | 402 | 39544939 ~ 39545320 (+) | True | G1290719 |
| TU1473045 | lncRNA | downstream | 3220 | 39547757 ~ 39548390 (+) | True | brca2 |
| TU1473047 | lncRNA | downstream | 4950 | 39549487 ~ 39550057 (+) | True | G1290723 |
| TU1473048 | lncRNA | downstream | 8268 | 39552805 ~ 39553148 (+) | True | G1290724 |
| TU1473059 | lncRNA | downstream | 58938 | 39603475 ~ 39603869 (+) | True | G1290735 |
| XM_036945535.1 | mRNA | upstream | 454542 | 39088073 ~ 39089636 (+) | False | LOC110490841 |
| XM_021564185.2 | mRNA | upstream | 459478 | 39082814 ~ 39084700 (+) | True | LOC110490726 |
| LOC110490723 | mRNA | upstream | 688070 | 38855250 ~ 38856108 (+) | True | LOC110490723 |
| XM_036944344.1 | mRNA | upstream | 963422 | 38576635 ~ 38580756 (+) | False | LOC110490039 |
| XM_021563144.2 | mRNA | downstream | 2807 | 39547344 ~ 39589108 (+) | False | brca2 |
| XM_021563147.2 | mRNA | downstream | 11332 | 39555869 ~ 39589108 (+) | False | brca2 |
| XM_021563152.2 | mRNA | downstream | 11356 | 39555893 ~ 39589108 (+) | False | brca2 |
| XM_021563145.2 | mRNA | downstream | 11656 | 39556193 ~ 39589108 (+) | False | brca2 |
| XM_021563148.2 | mRNA | downstream | 11656 | 39556193 ~ 39589108 (+) | False | brca2 |
| TU1472866 | other | upstream | 417169 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1472790 | other | upstream | 506519 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471908 | other | upstream | 943937 | 38594880 ~ 38600241 (+) | False | G1289710 |
| TU1471909 | other | upstream | 943937 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1471681 | other | upstream | 1360175 | 38183436 ~ 38184003 (+) | True | G1289491 |
| TU1473879 | other | downstream | 523021 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1473916 | other | downstream | 575732 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1475600 | other | downstream | 2038836 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 2038836 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1475855 | other | downstream | 2364497 | 41909034 ~ 41909611 (+) | True | G1293295 |
