Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1478058 |
| length | 625 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1295316 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43548792 ~ 43549416 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478048 | lncRNA | upstream | 7197 | 43541273 ~ 43541595 (+) | True | G1295306 |
| TU1478031 | lncRNA | upstream | 24733 | 43523818 ~ 43524059 (+) | True | G1295289 |
| TU1477907 | lncRNA | upstream | 38338 | 43509101 ~ 43510454 (+) | True | trnas-gcu-157 |
| TU1477935 | lncRNA | upstream | 91016 | 43426842 ~ 43457776 (+) | True | G1295208 |
| TU1477906 | lncRNA | upstream | 195162 | 43347076 ~ 43353630 (+) | True | G1295185 |
| TU1478088 | lncRNA | downstream | 34868 | 43584284 ~ 43584574 (+) | True | G1295346 |
| TU1478071 | lncRNA | downstream | 37509 | 43586925 ~ 43588112 (+) | True | G1295329 |
| TU1478073 | lncRNA | downstream | 45683 | 43595099 ~ 43595445 (+) | True | G1295331 |
| TU1478093 | lncRNA | downstream | 48161 | 43597577 ~ 43598229 (+) | True | G1295349 |
| TU1478111 | lncRNA | downstream | 71499 | 43620915 ~ 43621192 (+) | True | G1295365 |
| XM_021563274.2 | mRNA | upstream | 14558 | 43530002 ~ 43534234 (+) | True | LOC110490104 |
| trnas-gcu-162 | mRNA | upstream | 31772 | 43516939 ~ 43517020 (+) | True | trnas-gcu-162 |
| trnas-gcu-161 | mRNA | upstream | 34003 | 43514708 ~ 43514789 (+) | True | trnas-gcu-161 |
| trnas-gcu-160 | mRNA | upstream | 35460 | 43513251 ~ 43513332 (+) | True | trnas-gcu-160 |
| trnas-gcu-159 | mRNA | upstream | 36578 | 43512133 ~ 43512214 (+) | True | trnas-gcu-159 |
| XM_021563276.2 | mRNA | downstream | 91965 | 43641381 ~ 43692014 (+) | False | LOC110490107 |
| XM_021563277.2 | mRNA | downstream | 92163 | 43641579 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563280.2 | mRNA | downstream | 92327 | 43641743 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563278.2 | mRNA | downstream | 92676 | 43642092 ~ 43691518 (+) | False | LOC110490107 |
| XM_036944401.1 | mRNA | downstream | 96823 | 43646239 ~ 43691518 (+) | True | LOC110490107 |
| TU1476968 | other | upstream | 780855 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 1639181 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1475600 | other | upstream | 1960648 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | upstream | 1960705 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1473916 | other | upstream | 3418058 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1478092 | other | downstream | 47508 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1478516 | other | downstream | 366762 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478633 | other | downstream | 480020 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478844 | other | downstream | 772087 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 997763 | 44547179 ~ 44581048 (+) | True | G1296266 |
