Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1478093 |
| length | 653 |
| lncRNA type | antisense_over |
| GC content | 0.57 |
| exon number | 1 |
| gene id | G1295349 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43597577 ~ 43598229 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478073 | lncRNA | upstream | 2132 | 43595099 ~ 43595445 (+) | True | G1295331 |
| TU1478071 | lncRNA | upstream | 9465 | 43586925 ~ 43588112 (+) | True | G1295329 |
| TU1478088 | lncRNA | upstream | 13003 | 43584284 ~ 43584574 (+) | True | G1295346 |
| TU1478058 | lncRNA | upstream | 48161 | 43548792 ~ 43549416 (+) | True | G1295316 |
| TU1478048 | lncRNA | upstream | 55982 | 43541273 ~ 43541595 (+) | True | G1295306 |
| TU1478111 | lncRNA | downstream | 22686 | 43620915 ~ 43621192 (+) | True | G1295365 |
| TU1478117 | lncRNA | downstream | 33828 | 43632057 ~ 43632307 (+) | True | G1295371 |
| TU1478105 | lncRNA | downstream | 94102 | 43692331 ~ 43692788 (+) | True | G1295359 |
| TU1478133 | lncRNA | downstream | 99136 | 43697365 ~ 43697582 (+) | False | LOC110490730 |
| TU1478134 | lncRNA | downstream | 99445 | 43697674 ~ 43697965 (+) | True | LOC110490730 |
| XM_021563274.2 | mRNA | upstream | 63343 | 43530002 ~ 43534234 (+) | True | LOC110490104 |
| trnas-gcu-162 | mRNA | upstream | 80557 | 43516939 ~ 43517020 (+) | True | trnas-gcu-162 |
| trnas-gcu-161 | mRNA | upstream | 82788 | 43514708 ~ 43514789 (+) | True | trnas-gcu-161 |
| trnas-gcu-160 | mRNA | upstream | 84245 | 43513251 ~ 43513332 (+) | True | trnas-gcu-160 |
| trnas-gcu-159 | mRNA | upstream | 85363 | 43512133 ~ 43512214 (+) | True | trnas-gcu-159 |
| XM_021563276.2 | mRNA | downstream | 43152 | 43641381 ~ 43692014 (+) | False | LOC110490107 |
| XM_021563277.2 | mRNA | downstream | 43350 | 43641579 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563280.2 | mRNA | downstream | 43514 | 43641743 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563278.2 | mRNA | downstream | 43863 | 43642092 ~ 43691518 (+) | False | LOC110490107 |
| XM_036944401.1 | mRNA | downstream | 48010 | 43646239 ~ 43691518 (+) | True | LOC110490107 |
| TU1478092 | other | upstream | 113 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1476968 | other | upstream | 829640 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 1687966 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1475600 | other | upstream | 2009433 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | upstream | 2009490 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1478516 | other | downstream | 317949 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478633 | other | downstream | 431207 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478844 | other | downstream | 723274 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 948950 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1479009 | other | downstream | 1051472 | 44649701 ~ 44652079 (+) | True | G1296185 |
