Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1478138 |
| length | 959 |
| lncRNA type | intronic |
| GC content | 0.50 |
| exon number | 3 |
| gene id | G1295391 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43711035 ~ 43713182 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478134 | lncRNA | upstream | 13070 | 43697674 ~ 43697965 (+) | True | LOC110490730 |
| TU1478133 | lncRNA | upstream | 13453 | 43697365 ~ 43697582 (+) | False | LOC110490730 |
| TU1478105 | lncRNA | upstream | 18247 | 43692331 ~ 43692788 (+) | True | G1295359 |
| TU1478117 | lncRNA | upstream | 78728 | 43632057 ~ 43632307 (+) | True | G1295371 |
| TU1478111 | lncRNA | upstream | 89843 | 43620915 ~ 43621192 (+) | True | G1295365 |
| TU1478146 | lncRNA | downstream | 16913 | 43730095 ~ 43730785 (+) | False | G1295396 |
| TU1478145 | lncRNA | downstream | 17206 | 43730388 ~ 43730785 (+) | True | G1295396 |
| TU1478151 | lncRNA | downstream | 20460 | 43733642 ~ 43734363 (+) | True | G1295401 |
| TU1478152 | lncRNA | downstream | 21429 | 43734611 ~ 43734957 (+) | True | G1295402 |
| TU1478154 | lncRNA | downstream | 23085 | 43736267 ~ 43736786 (+) | True | G1295404 |
| LOC110490730 | mRNA | upstream | 13217 | 43696212 ~ 43697818 (+) | False | LOC110490730 |
| XM_021563276.2 | mRNA | upstream | 19021 | 43641381 ~ 43692014 (+) | False | LOC110490107 |
| XM_021563277.2 | mRNA | upstream | 19517 | 43641579 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563280.2 | mRNA | upstream | 19517 | 43641743 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563278.2 | mRNA | upstream | 19517 | 43642092 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563290.2 | mRNA | downstream | 284831 | 43998013 ~ 43999931 (+) | False | mrps17 |
| XM_021563291.2 | mRNA | downstream | 284886 | 43998068 ~ 43999931 (+) | True | mrps17 |
| NM_001160597.2 | mRNA | downstream | 292231 | 44005413 ~ 44024583 (+) | True | nipsnap2 |
| XM_036944415.1 | mRNA | downstream | 460170 | 44173352 ~ 44319896 (+) | False | cblb |
| XM_036944414.1 | mRNA | downstream | 460312 | 44173494 ~ 44319896 (+) | False | cblb |
| TU1478092 | other | upstream | 113571 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1476968 | other | upstream | 943098 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 1801424 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1475600 | other | upstream | 2122891 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1478516 | other | downstream | 202996 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478633 | other | downstream | 316254 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478844 | other | downstream | 608321 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 833997 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1479009 | other | downstream | 936519 | 44649701 ~ 44652079 (+) | True | G1296185 |
