Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1478165 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G1295415 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43751115 ~ 43751625 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478155 | lncRNA | upstream | 13356 | 43737451 ~ 43737759 (+) | True | G1295405 |
| TU1478154 | lncRNA | upstream | 14329 | 43736267 ~ 43736786 (+) | True | G1295404 |
| TU1478152 | lncRNA | upstream | 16158 | 43734611 ~ 43734957 (+) | True | G1295402 |
| TU1478151 | lncRNA | upstream | 16752 | 43733642 ~ 43734363 (+) | True | G1295401 |
| TU1478146 | lncRNA | upstream | 20330 | 43730095 ~ 43730785 (+) | False | G1295396 |
| TU1478197 | lncRNA | downstream | 53598 | 43805223 ~ 43805857 (+) | True | G1295447 |
| TU1478218 | lncRNA | downstream | 80535 | 43832160 ~ 43856264 (+) | True | G1295468 |
| TU1478514 | lncRNA | downstream | 162120 | 43913745 ~ 43913986 (+) | True | G1295728 |
| TU1478522 | lncRNA | downstream | 168608 | 43920233 ~ 43920460 (+) | True | G1295736 |
| TU1478561 | lncRNA | downstream | 197559 | 43949184 ~ 43949400 (+) | True | G1295775 |
| XM_021563282.2 | mRNA | upstream | 32769 | 43698455 ~ 43718346 (+) | False | mntb |
| XM_021563281.2 | mRNA | upstream | 32770 | 43698457 ~ 43718345 (+) | True | mntb |
| LOC110490730 | mRNA | upstream | 53297 | 43696212 ~ 43697818 (+) | False | LOC110490730 |
| XM_021563280.2 | mRNA | upstream | 59597 | 43641743 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563290.2 | mRNA | downstream | 246388 | 43998013 ~ 43999931 (+) | False | mrps17 |
| XM_021563291.2 | mRNA | downstream | 246443 | 43998068 ~ 43999931 (+) | True | mrps17 |
| NM_001160597.2 | mRNA | downstream | 253788 | 44005413 ~ 44024583 (+) | True | nipsnap2 |
| XM_036944415.1 | mRNA | downstream | 421727 | 44173352 ~ 44319896 (+) | False | cblb |
| XM_036944414.1 | mRNA | downstream | 421869 | 44173494 ~ 44319896 (+) | False | cblb |
| TU1478092 | other | upstream | 153651 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1476968 | other | upstream | 983178 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 1841504 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1475600 | other | upstream | 2162971 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1478516 | other | downstream | 164553 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478633 | other | downstream | 277811 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478844 | other | downstream | 569878 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 795554 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1479009 | other | downstream | 898076 | 44649701 ~ 44652079 (+) | True | G1296185 |
