Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1478574 |
| length | 460 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1295788 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43960438 ~ 43960897 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478573 | lncRNA | upstream | 832 | 43959399 ~ 43959606 (+) | True | G1295787 |
| TU1478561 | lncRNA | upstream | 11038 | 43949184 ~ 43949400 (+) | True | G1295775 |
| TU1478522 | lncRNA | upstream | 39978 | 43920233 ~ 43920460 (+) | True | G1295736 |
| TU1478514 | lncRNA | upstream | 46452 | 43913745 ~ 43913986 (+) | True | G1295728 |
| TU1478218 | lncRNA | upstream | 104174 | 43832160 ~ 43856264 (+) | True | G1295468 |
| TU1478575 | lncRNA | downstream | 1088 | 43961985 ~ 43962297 (+) | True | G1295789 |
| TU1478631 | lncRNA | downstream | 66690 | 44027587 ~ 44027878 (+) | True | G1295843 |
| TU1478637 | lncRNA | downstream | 76493 | 44037390 ~ 44037673 (+) | True | G1295849 |
| TU1478662 | lncRNA | downstream | 110089 | 44070986 ~ 44123435 (+) | True | G1295872 |
| TU1478677 | lncRNA | downstream | 133905 | 44094802 ~ 44095443 (+) | True | G1295887 |
| XM_021563282.2 | mRNA | upstream | 242092 | 43698455 ~ 43718346 (+) | False | mntb |
| XM_021563281.2 | mRNA | upstream | 242093 | 43698457 ~ 43718345 (+) | True | mntb |
| LOC110490730 | mRNA | upstream | 262620 | 43696212 ~ 43697818 (+) | False | LOC110490730 |
| XM_021563280.2 | mRNA | upstream | 268920 | 43641743 ~ 43691518 (+) | False | LOC110490107 |
| XM_021563290.2 | mRNA | downstream | 37116 | 43998013 ~ 43999931 (+) | False | mrps17 |
| XM_021563291.2 | mRNA | downstream | 37171 | 43998068 ~ 43999931 (+) | True | mrps17 |
| NM_001160597.2 | mRNA | downstream | 44516 | 44005413 ~ 44024583 (+) | True | nipsnap2 |
| XM_036944415.1 | mRNA | downstream | 212455 | 44173352 ~ 44319896 (+) | False | cblb |
| XM_036944414.1 | mRNA | downstream | 212597 | 44173494 ~ 44319896 (+) | False | cblb |
| TU1478516 | other | upstream | 43959 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478092 | other | upstream | 362974 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1476968 | other | upstream | 1192501 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 2050827 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1475602 | other | upstream | 2372351 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1478633 | other | downstream | 68539 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478844 | other | downstream | 360606 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 586282 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1479009 | other | downstream | 688804 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1481520 | other | downstream | 2293442 | 46254339 ~ 46260437 (+) | False | G1298452 |
