Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1478835 |
| length | 326 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1296030 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 44152695 ~ 44153020 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478662 | lncRNA | upstream | 29260 | 44070986 ~ 44123435 (+) | True | G1295872 |
| TU1478677 | lncRNA | upstream | 57252 | 44094802 ~ 44095443 (+) | True | G1295887 |
| TU1478637 | lncRNA | upstream | 115022 | 44037390 ~ 44037673 (+) | True | G1295849 |
| TU1478631 | lncRNA | upstream | 124817 | 44027587 ~ 44027878 (+) | True | G1295843 |
| TU1478575 | lncRNA | upstream | 190398 | 43961985 ~ 43962297 (+) | True | G1295789 |
| TU1478864 | lncRNA | downstream | 15068 | 44168088 ~ 44168835 (+) | True | G1296051 |
| TU1478861 | lncRNA | downstream | 237462 | 44390482 ~ 44391077 (+) | True | G1296050 |
| TU1479004 | lncRNA | downstream | 244851 | 44397871 ~ 44613813 (+) | True | G1296182 |
| TU1479052 | lncRNA | downstream | 282247 | 44435267 ~ 44436862 (+) | True | G1296227 |
| TU1479053 | lncRNA | downstream | 291049 | 44444069 ~ 44456091 (+) | True | G1296228 |
| NM_001160597.2 | mRNA | upstream | 128112 | 44005413 ~ 44024583 (+) | True | nipsnap2 |
| XM_021563290.2 | mRNA | upstream | 152764 | 43998013 ~ 43999931 (+) | False | mrps17 |
| XM_021563291.2 | mRNA | upstream | 152764 | 43998068 ~ 43999931 (+) | True | mrps17 |
| XM_021563282.2 | mRNA | upstream | 434349 | 43698455 ~ 43718346 (+) | False | mntb |
| XM_036944415.1 | mRNA | downstream | 20332 | 44173352 ~ 44319896 (+) | False | cblb |
| XM_036944414.1 | mRNA | downstream | 20474 | 44173494 ~ 44319896 (+) | False | cblb |
| XM_036944416.1 | mRNA | downstream | 20476 | 44173496 ~ 44319896 (+) | False | cblb |
| XM_021563294.2 | mRNA | downstream | 20481 | 44173501 ~ 44326246 (+) | False | cblb |
| XM_021563293.2 | mRNA | downstream | 20483 | 44173503 ~ 44326246 (+) | False | cblb |
| TU1478633 | other | upstream | 122834 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478516 | other | upstream | 236216 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478092 | other | upstream | 555231 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1476968 | other | upstream | 1384758 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 2243084 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1478844 | other | downstream | 168483 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 394159 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1479009 | other | downstream | 496681 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1481520 | other | downstream | 2101319 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1481549 | other | downstream | 2161232 | 46314252 ~ 46316002 (+) | True | brd1a |
