Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1481572 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G1298496 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 46345868 ~ 46346080 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1481571 | lncRNA | upstream | 580 | 46344917 ~ 46345288 (+) | True | G1298495 |
| TU1481523 | lncRNA | upstream | 85431 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1481524 | lncRNA | upstream | 90487 | 46254339 ~ 46255381 (+) | True | G1298452 |
| TU1481487 | lncRNA | upstream | 121016 | 46224638 ~ 46224852 (+) | True | G1298424 |
| TU1481486 | lncRNA | upstream | 121827 | 46223832 ~ 46224041 (+) | True | G1298423 |
| TU1481701 | lncRNA | downstream | 30740 | 46376820 ~ 46377155 (+) | True | G1298603 |
| TU1481702 | lncRNA | downstream | 31155 | 46377235 ~ 46377447 (+) | True | G1298604 |
| TU1481976 | lncRNA | downstream | 216123 | 46562203 ~ 46562576 (+) | True | G1298863 |
| TU1482100 | lncRNA | downstream | 299711 | 46645791 ~ 46646090 (+) | True | G1298985 |
| TU1482102 | lncRNA | downstream | 301564 | 46647644 ~ 46647950 (+) | True | G1298987 |
| XM_021563371.2 | mRNA | upstream | 29793 | 46293582 ~ 46316075 (+) | False | brd1a |
| XM_021563370.2 | mRNA | upstream | 29793 | 46293584 ~ 46316075 (+) | False | brd1a |
| XM_021563367.2 | mRNA | upstream | 77135 | 46260593 ~ 46268733 (+) | False | alg12 |
| XM_036944447.1 | mRNA | upstream | 77135 | 46260593 ~ 46268733 (+) | True | alg12 |
| XM_021563365.2 | mRNA | upstream | 173051 | 46168371 ~ 46172817 (+) | True | LOC110490155 |
| XM_036944453.1 | mRNA | downstream | 1066357 | 47412437 ~ 47443051 (+) | False | cerk |
| XM_036944452.1 | mRNA | downstream | 1066360 | 47412440 ~ 47443051 (+) | True | cerk |
| XM_021563386.2 | mRNA | downstream | 1372838 | 47718918 ~ 47723038 (+) | False | srr |
| XM_021563387.2 | mRNA | downstream | 1373465 | 47719545 ~ 47723038 (+) | False | srr |
| XM_021563388.2 | mRNA | downstream | 1387439 | 47733519 ~ 47736943 (+) | True | alg10 |
| TU1481549 | other | upstream | 29866 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1481520 | other | upstream | 85431 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1479009 | other | upstream | 1693789 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1479092 | other | upstream | 1764820 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1478844 | other | upstream | 2019689 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1483075 | other | downstream | 1223750 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1483849 | other | downstream | 1600288 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1484302 | other | downstream | 2013748 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1484559 | other | downstream | 2238627 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484840 | other | downstream | 2583966 | 48930046 ~ 48930588 (+) | True | G1301458 |
