Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1483074 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G1299893 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 47568534 ~ 47568819 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1483018 | lncRNA | upstream | 72733 | 47492786 ~ 47495801 (+) | True | G1299840 |
| TU1483002 | lncRNA | upstream | 130979 | 47429613 ~ 47437555 (+) | True | G1299825 |
| TU1482999 | lncRNA | upstream | 142676 | 47425647 ~ 47425858 (+) | True | G1299822 |
| TU1482998 | lncRNA | upstream | 143945 | 47424368 ~ 47424589 (+) | True | G1299821 |
| TU1482946 | lncRNA | upstream | 220849 | 47347385 ~ 47347685 (+) | True | G1299769 |
| TU1483537 | lncRNA | downstream | 148866 | 47717685 ~ 47719159 (+) | True | srr |
| TU1483563 | lncRNA | downstream | 168562 | 47737381 ~ 47737608 (+) | True | G1300334 |
| TU1483575 | lncRNA | downstream | 189265 | 47758084 ~ 47758394 (+) | True | G1300346 |
| TU1483577 | lncRNA | downstream | 193450 | 47762269 ~ 47762483 (+) | True | G1300348 |
| TU1483594 | lncRNA | downstream | 218166 | 47786985 ~ 47787191 (+) | True | G1300363 |
| XM_036944453.1 | mRNA | upstream | 125483 | 47412437 ~ 47443051 (+) | False | cerk |
| XM_036944452.1 | mRNA | upstream | 125483 | 47412440 ~ 47443051 (+) | True | cerk |
| XM_021563371.2 | mRNA | upstream | 1252459 | 46293582 ~ 46316075 (+) | False | brd1a |
| XM_021563370.2 | mRNA | upstream | 1252459 | 46293584 ~ 46316075 (+) | False | brd1a |
| XM_036944447.1 | mRNA | upstream | 1299801 | 46260593 ~ 46268733 (+) | True | alg12 |
| XM_021563386.2 | mRNA | downstream | 150099 | 47718918 ~ 47723038 (+) | False | srr |
| XM_021563387.2 | mRNA | downstream | 150726 | 47719545 ~ 47723038 (+) | False | srr |
| XM_021563388.2 | mRNA | downstream | 164700 | 47733519 ~ 47736943 (+) | True | alg10 |
| XR_002468673.2 | mRNA | downstream | 430309 | 47999128 ~ 48001885 (+) | True | LOC110490177 |
| XM_036944465.1 | mRNA | downstream | 549955 | 48118774 ~ 48146269 (+) | False | LOC110490734 |
| TU1481549 | other | upstream | 1252532 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1481520 | other | upstream | 1308097 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1479009 | other | upstream | 2916455 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1479092 | other | upstream | 2987486 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1478844 | other | upstream | 3242355 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1483075 | other | downstream | 1011 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1483849 | other | downstream | 377549 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1484302 | other | downstream | 791009 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1484559 | other | downstream | 1015888 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484840 | other | downstream | 1361227 | 48930046 ~ 48930588 (+) | True | G1301458 |
