Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1483605 |
| length | 1046 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1300373 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 47804051 ~ 47805212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1483598 | lncRNA | upstream | 12000 | 47791860 ~ 47792167 (+) | True | G1300367 |
| TU1483594 | lncRNA | upstream | 16976 | 47786985 ~ 47787191 (+) | True | G1300363 |
| TU1483577 | lncRNA | upstream | 41684 | 47762269 ~ 47762483 (+) | True | G1300348 |
| TU1483575 | lncRNA | upstream | 45773 | 47758084 ~ 47758394 (+) | True | G1300346 |
| TU1483563 | lncRNA | upstream | 66559 | 47737381 ~ 47737608 (+) | True | G1300334 |
| TU1483621 | lncRNA | downstream | 17227 | 47822439 ~ 47823290 (+) | False | G1300384 |
| TU1483622 | lncRNA | downstream | 17227 | 47822439 ~ 47823290 (+) | True | G1300384 |
| TU1483648 | lncRNA | downstream | 42943 | 47848155 ~ 47867289 (+) | True | G1300410 |
| TU1483825 | lncRNA | downstream | 125913 | 47931125 ~ 47931350 (+) | True | G1300580 |
| TU1483828 | lncRNA | downstream | 127215 | 47932427 ~ 47932677 (+) | True | G1300583 |
| XM_021563388.2 | mRNA | upstream | 67224 | 47733519 ~ 47736943 (+) | True | alg10 |
| XM_021563386.2 | mRNA | upstream | 81129 | 47718918 ~ 47723038 (+) | False | srr |
| XM_021563387.2 | mRNA | upstream | 81129 | 47719545 ~ 47723038 (+) | False | srr |
| XM_036944453.1 | mRNA | upstream | 361116 | 47412437 ~ 47443051 (+) | False | cerk |
| XR_002468673.2 | mRNA | downstream | 193916 | 47999128 ~ 48001885 (+) | True | LOC110490177 |
| XM_036944465.1 | mRNA | downstream | 313562 | 48118774 ~ 48146269 (+) | False | LOC110490734 |
| XM_036944466.1 | mRNA | downstream | 313562 | 48118774 ~ 48146269 (+) | True | LOC110490734 |
| XM_021563406.2 | mRNA | downstream | 341860 | 48147072 ~ 48161884 (+) | True | slco1d1 |
| XR_005036099.1 | mRNA | downstream | 370232 | 48175444 ~ 48179144 (+) | True | LOC118938805 |
| TU1483075 | other | upstream | 233504 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1481549 | other | upstream | 1488165 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1481520 | other | upstream | 1543730 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1479009 | other | upstream | 3152088 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1479092 | other | upstream | 3223119 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1483849 | other | downstream | 141156 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1484302 | other | downstream | 554616 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1484559 | other | downstream | 779495 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484840 | other | downstream | 1124834 | 48930046 ~ 48930588 (+) | True | G1301458 |
| TU1485115 | other | downstream | 1590011 | 49395223 ~ 49395858 (+) | False | G1301706 |
