Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1484202 |
| length | 375 |
| lncRNA type | read_through |
| GC content | 0.35 |
| exon number | 3 |
| gene id | G1300886 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48191240 ~ 48216996 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
48,172,000
48,176,000
48,180,000
48,184,000
48,188,000
48,192,000
48,196,000
48,200,000
48,204,000
48,208,000
48,212,000
48,216,000
48,220,000
48,224,000
NC_048579.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1484193 | lncRNA | downstream | 247 | 48189810 ~ 48190993 (-) | False | G1300885 |
| TU1484109 | lncRNA | downstream | 29350 | 48153966 ~ 48161890 (-) | True | G1300816 |
| TU1484113 | lncRNA | downstream | 43022 | 48142185 ~ 48148218 (-) | True | LOC118938803 |
| TU1484158 | lncRNA | downstream | 69167 | 48121002 ~ 48122073 (-) | True | G1300860 |
| TU1484155 | lncRNA | downstream | 71093 | 48118796 ~ 48120147 (-) | True | G1300858 |
| TU1484196 | lncRNA | upstream | 10783 | 48227779 ~ 48257598 (-) | False | G1300885 |
| TU1484186 | lncRNA | upstream | 22822 | 48239818 ~ 48257598 (-) | True | G1300885 |
| TU1484376 | lncRNA | upstream | 62755 | 48279751 ~ 48281566 (-) | False | G1301032 |
| TU1484377 | lncRNA | upstream | 63196 | 48280192 ~ 48281566 (-) | True | G1301032 |
| TU1484381 | lncRNA | upstream | 67592 | 48284588 ~ 48284800 (-) | True | G1301035 |
| XM_036944467.1 | mRNA | downstream | 10299 | 48179278 ~ 48180941 (-) | True | LOC118938804 |
| XR_005036097.1 | mRNA | downstream | 44888 | 48142165 ~ 48146352 (-) | False | LOC118938803 |
| XR_005036096.1 | mRNA | downstream | 44888 | 48142942 ~ 48146352 (-) | False | LOC118938803 |
| XR_005036098.1 | mRNA | downstream | 44888 | 48142942 ~ 48146352 (-) | False | LOC118938803 |
| XM_021563404.2 | mRNA | downstream | 87932 | 48001878 ~ 48103308 (-) | True | LOC110490175 |
| XR_005036102.1 | mRNA | upstream | 4140 | 48221136 ~ 48221639 (-) | True | LOC110490181 |
| XM_036945586.1 | mRNA | upstream | 10638 | 48227634 ~ 48229523 (-) | True | LOC118938921 |
| XM_036945543.1 | mRNA | upstream | 22633 | 48239629 ~ 48240754 (-) | True | LOC118938890 |
| XM_036944469.1 | mRNA | upstream | 23795 | 48240791 ~ 48241911 (-) | True | LOC110490179 |
| XM_036945544.1 | mRNA | upstream | 32682 | 48249678 ~ 48252315 (-) | True | LOC110516898 |
| TU1483446 | other | downstream | 487202 | 47652510 ~ 47704038 (-) | True | celsr1a |
| TU1483202 | other | downstream | 971625 | 47217536 ~ 47219615 (-) | False | tbc1d22a |
| TU1483203 | other | downstream | 971625 | 47217536 ~ 47219615 (-) | True | tbc1d22a |
| TU1482596 | other | downstream | 1237816 | 46822263 ~ 46953424 (-) | True | tafa5a |
| TU1482577 | other | downstream | 1238646 | 46822263 ~ 46952594 (-) | False | tafa5a |
| TU1485276 | other | upstream | 618598 | 48835594 ~ 48839151 (-) | True | si:dkeyp-27e10.3 |
| TU1486102 | other | upstream | 1446955 | 49663951 ~ 49664296 (-) | True | G1302602 |
| TU1486703 | other | upstream | 2082468 | 50299464 ~ 50301007 (-) | True | LOC110490244 |
| TU1487991 | other | upstream | 2982233 | 51199229 ~ 51205861 (-) | True | LOC110490264 |
| TU1488526 | other | upstream | 3569635 | 51786631 ~ 51793354 (-) | False | LOC110490744 |
