Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1484255 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1300923 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48269946 ~ 48270171 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1484034 | lncRNA | upstream | 13500 | 48227136 ~ 48256446 (+) | True | G1300752 |
| TU1484001 | lncRNA | upstream | 19836 | 48249256 ~ 48250110 (+) | True | G1300730 |
| TU1484037 | lncRNA | upstream | 28147 | 48229713 ~ 48241799 (+) | True | G1300754 |
| TU1483971 | lncRNA | upstream | 39037 | 48222596 ~ 48230909 (+) | True | G1300712 |
| TU1484032 | lncRNA | upstream | 40662 | 48222155 ~ 48229284 (+) | True | G1300750 |
| TU1484264 | lncRNA | downstream | 3023 | 48273194 ~ 48273489 (+) | True | G1300931 |
| TU1484292 | lncRNA | downstream | 74648 | 48344819 ~ 48349516 (+) | False | G1300957 |
| TU1484293 | lncRNA | downstream | 78629 | 48348800 ~ 48349516 (+) | True | G1300957 |
| TU1484303 | lncRNA | downstream | 90544 | 48360715 ~ 48360941 (+) | True | G1300967 |
| TU1484288 | lncRNA | downstream | 92566 | 48362737 ~ 48367701 (+) | True | G1300953 |
| XM_021564282.2 | mRNA | upstream | 2771 | 48264481 ~ 48267175 (+) | True | LOC110490846 |
| XR_005036099.1 | mRNA | upstream | 90802 | 48175444 ~ 48179144 (+) | True | LOC118938805 |
| XM_021563406.2 | mRNA | upstream | 108062 | 48147072 ~ 48161884 (+) | True | slco1d1 |
| XM_036944465.1 | mRNA | upstream | 123677 | 48118774 ~ 48146269 (+) | False | LOC110490734 |
| XM_036944466.1 | mRNA | upstream | 123677 | 48118774 ~ 48146269 (+) | True | LOC110490734 |
| XM_021563417.2 | mRNA | downstream | 30431 | 48300602 ~ 48308741 (+) | True | pyroxd1 |
| XM_021563418.2 | mRNA | downstream | 58626 | 48328797 ~ 48332219 (+) | False | LOC110490186 |
| XM_021563419.2 | mRNA | downstream | 58626 | 48328797 ~ 48332219 (+) | False | LOC110490186 |
| XR_002468675.2 | mRNA | downstream | 58626 | 48328797 ~ 48332219 (+) | True | LOC110490186 |
| XM_021563423.2 | mRNA | downstream | 65960 | 48336131 ~ 48337866 (+) | False | LOC110490188 |
| TU1483849 | other | upstream | 322054 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1483075 | other | upstream | 699283 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1481549 | other | upstream | 1953944 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1481520 | other | upstream | 2009509 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1479009 | other | upstream | 3617867 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1484302 | other | downstream | 89657 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1484559 | other | downstream | 314536 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484840 | other | downstream | 659875 | 48930046 ~ 48930588 (+) | True | G1301458 |
| TU1485115 | other | downstream | 1125052 | 49395223 ~ 49395858 (+) | False | G1301706 |
| TU1485120 | other | downstream | 1128287 | 49398458 ~ 49410313 (+) | True | LOC110490228 |
