Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1484308 |
| length | 352 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G1300972 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48378559 ~ 48378910 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1484288 | lncRNA | upstream | 10858 | 48362737 ~ 48367701 (+) | True | G1300953 |
| TU1484303 | lncRNA | upstream | 17618 | 48360715 ~ 48360941 (+) | True | G1300967 |
| TU1484292 | lncRNA | upstream | 29043 | 48344819 ~ 48349516 (+) | False | G1300957 |
| TU1484293 | lncRNA | upstream | 29043 | 48348800 ~ 48349516 (+) | True | G1300957 |
| TU1484264 | lncRNA | upstream | 105070 | 48273194 ~ 48273489 (+) | True | G1300931 |
| TU1484309 | lncRNA | downstream | 611 | 48379521 ~ 48379762 (+) | True | G1300973 |
| TU1484318 | lncRNA | downstream | 3446 | 48382356 ~ 48382602 (+) | True | G1300979 |
| TU1484320 | lncRNA | downstream | 4842 | 48383752 ~ 48384048 (+) | True | G1300981 |
| TU1484322 | lncRNA | downstream | 6386 | 48385296 ~ 48385580 (+) | True | G1300983 |
| TU1484329 | lncRNA | downstream | 19512 | 48398422 ~ 48399496 (+) | True | G1300990 |
| NM_001281386.1 | mRNA | upstream | 18006 | 48359799 ~ 48360553 (+) | False | kiss2 |
| XM_021563423.2 | mRNA | upstream | 40693 | 48336131 ~ 48337866 (+) | False | LOC110490188 |
| XM_021563422.2 | mRNA | upstream | 40693 | 48336679 ~ 48337866 (+) | True | LOC110490188 |
| XM_021563419.2 | mRNA | upstream | 46340 | 48328797 ~ 48332219 (+) | False | LOC110490186 |
| XM_036944471.1 | mRNA | downstream | 54848 | 48433758 ~ 48441874 (+) | True | LOC110490738 |
| XM_021563435.2 | mRNA | downstream | 91111 | 48470021 ~ 48479144 (+) | False | LOC110490194 |
| XM_021563436.2 | mRNA | downstream | 91111 | 48470021 ~ 48479877 (+) | False | LOC110490194 |
| XM_021563437.2 | mRNA | downstream | 91133 | 48470043 ~ 48479144 (+) | False | LOC110490194 |
| XM_021563439.2 | mRNA | downstream | 91160 | 48470070 ~ 48479144 (+) | False | LOC110490194 |
| TU1484302 | other | upstream | 18120 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1483849 | other | upstream | 430667 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1483075 | other | upstream | 807896 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1481549 | other | upstream | 2062557 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1481520 | other | upstream | 2118122 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1484559 | other | downstream | 205797 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484840 | other | downstream | 551136 | 48930046 ~ 48930588 (+) | True | G1301458 |
| TU1485115 | other | downstream | 1016313 | 49395223 ~ 49395858 (+) | False | G1301706 |
| TU1485120 | other | downstream | 1019548 | 49398458 ~ 49410313 (+) | True | LOC110490228 |
| TU1486531 | other | downstream | 1799364 | 50178274 ~ 50178565 (+) | True | G1303015 |
