Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1484523 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G1301169 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48526878 ~ 48527123 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1484521 | lncRNA | upstream | 2661 | 48524004 ~ 48524217 (+) | True | G1301167 |
| TU1484518 | lncRNA | upstream | 5314 | 48521343 ~ 48521564 (+) | True | G1301164 |
| TU1484516 | lncRNA | upstream | 7254 | 48519355 ~ 48519624 (+) | True | G1301162 |
| TU1484498 | lncRNA | upstream | 35588 | 48491089 ~ 48491290 (+) | True | G1301144 |
| TU1484494 | lncRNA | upstream | 38254 | 48488424 ~ 48488624 (+) | True | G1301140 |
| TU1484527 | lncRNA | downstream | 3432 | 48530555 ~ 48530793 (+) | True | G1301173 |
| TU1484532 | lncRNA | downstream | 10717 | 48537840 ~ 48538177 (+) | True | G1301178 |
| TU1484536 | lncRNA | downstream | 14612 | 48541735 ~ 48542001 (+) | True | G1301182 |
| TU1484615 | lncRNA | downstream | 67324 | 48594447 ~ 48594697 (+) | True | G1301256 |
| TU1484632 | lncRNA | downstream | 75528 | 48602651 ~ 48603258 (+) | False | G1301272 |
| XM_021563442.2 | mRNA | upstream | 17046 | 48492575 ~ 48509832 (+) | True | LOC110490196 |
| XM_021563441.2 | mRNA | upstream | 17341 | 48492575 ~ 48509537 (+) | False | LOC110490196 |
| XM_036944475.1 | mRNA | upstream | 47001 | 48470101 ~ 48479877 (+) | False | LOC110490194 |
| XM_036944474.1 | mRNA | upstream | 47001 | 48470102 ~ 48479877 (+) | True | LOC110490194 |
| XM_021563439.2 | mRNA | upstream | 47734 | 48470070 ~ 48479144 (+) | False | LOC110490194 |
| XM_021563465.2 | mRNA | downstream | 223027 | 48750150 ~ 48752766 (+) | True | lamtor4 |
| XM_021563456.2 | mRNA | downstream | 230082 | 48757205 ~ 48767893 (+) | False | LOC110490204 |
| XM_036944482.1 | mRNA | downstream | 230839 | 48757962 ~ 48767893 (+) | False | LOC110490204 |
| XM_021563457.2 | mRNA | downstream | 231164 | 48758287 ~ 48767893 (+) | True | LOC110490204 |
| XM_021563458.2 | mRNA | downstream | 248333 | 48775456 ~ 48783034 (+) | True | LOC110490205 |
| TU1484302 | other | upstream | 166439 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1483849 | other | upstream | 578986 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1483075 | other | upstream | 956215 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1481549 | other | upstream | 2210876 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1481520 | other | upstream | 2266441 | 46254339 ~ 46260437 (+) | False | G1298452 |
| TU1484559 | other | downstream | 57584 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484840 | other | downstream | 402923 | 48930046 ~ 48930588 (+) | True | G1301458 |
| TU1485115 | other | downstream | 868100 | 49395223 ~ 49395858 (+) | False | G1301706 |
| TU1485120 | other | downstream | 871335 | 49398458 ~ 49410313 (+) | True | LOC110490228 |
| TU1486531 | other | downstream | 1651151 | 50178274 ~ 50178565 (+) | True | G1303015 |
