Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1484821 |
| length | 285 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1301439 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 48898688 ~ 48898972 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1484816 | lncRNA | upstream | 4947 | 48893538 ~ 48893741 (+) | True | G1301434 |
| TU1484646 | lncRNA | upstream | 130452 | 48767980 ~ 48768236 (+) | True | G1301285 |
| TU1484730 | lncRNA | upstream | 167127 | 48727392 ~ 48731561 (+) | False | G1301366 |
| TU1484731 | lncRNA | upstream | 167127 | 48727392 ~ 48731561 (+) | True | G1301366 |
| TU1484722 | lncRNA | upstream | 189304 | 48709140 ~ 48709384 (+) | True | G1301358 |
| TU1484828 | lncRNA | downstream | 9546 | 48908518 ~ 48908726 (+) | True | G1301446 |
| TU1484832 | lncRNA | downstream | 18024 | 48916996 ~ 48917271 (+) | True | G1301450 |
| TU1484843 | lncRNA | downstream | 36221 | 48935193 ~ 48935406 (+) | True | G1301461 |
| TU1484844 | lncRNA | downstream | 37804 | 48936776 ~ 48937060 (+) | True | G1301462 |
| TU1484851 | lncRNA | downstream | 43581 | 48942553 ~ 48943105 (+) | True | G1301468 |
| XM_021563482.2 | mRNA | upstream | 39156 | 48852579 ~ 48859532 (+) | True | LOC110490215 |
| XM_021563458.2 | mRNA | upstream | 115654 | 48775456 ~ 48783034 (+) | True | LOC110490205 |
| XM_021563456.2 | mRNA | upstream | 130795 | 48757205 ~ 48767893 (+) | False | LOC110490204 |
| XM_021563483.2 | mRNA | downstream | 56098 | 48955070 ~ 48957811 (+) | True | LOC110490216 |
| LOC118938892 | mRNA | downstream | 94205 | 48993177 ~ 48993971 (+) | True | LOC118938892 |
| XR_005036106.1 | mRNA | downstream | 112349 | 49011321 ~ 49015350 (+) | True | LOC118938811 |
| LOC118938893 | mRNA | downstream | 137020 | 49035992 ~ 49036786 (+) | True | LOC118938893 |
| XM_021563485.2 | mRNA | downstream | 152943 | 49051915 ~ 49058766 (+) | False | LOC110490217 |
| TU1484559 | other | upstream | 313425 | 48584707 ~ 48585263 (+) | True | G1301200 |
| TU1484302 | other | upstream | 538249 | 48359828 ~ 48360439 (+) | True | kiss2 |
| TU1483849 | other | upstream | 950796 | 47946368 ~ 47947892 (+) | True | G1300598 |
| TU1483075 | other | upstream | 1328025 | 47569830 ~ 47570663 (+) | True | G1299894 |
| TU1481549 | other | upstream | 2582686 | 46314252 ~ 46316002 (+) | True | brd1a |
| TU1484840 | other | downstream | 31074 | 48930046 ~ 48930588 (+) | True | G1301458 |
| TU1485115 | other | downstream | 496251 | 49395223 ~ 49395858 (+) | False | G1301706 |
| TU1485120 | other | downstream | 499486 | 49398458 ~ 49410313 (+) | True | LOC110490228 |
| TU1486531 | other | downstream | 1279302 | 50178274 ~ 50178565 (+) | True | G1303015 |
| TU1486619 | other | downstream | 1402473 | 50301445 ~ 50302351 (+) | True | G1303095 |
