Item | Value |
---|---|
RNA id | TU1486541 |
length | 180 |
lncRNA type | inter_gene |
GC content | 0.39 |
exon number | 1 |
gene id | G1303024 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 50284000 ~ 50284179 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1486537 | lncRNA | upstream | 44926 | 50232428 ~ 50239074 (+) | False | G1303020 |
TU1486536 | lncRNA | upstream | 44926 | 50236651 ~ 50239074 (+) | True | G1303020 |
TU1486557 | lncRNA | upstream | 53376 | 50223183 ~ 50230624 (+) | True | G1303040 |
TU1486535 | lncRNA | upstream | 86849 | 50196844 ~ 50197151 (+) | True | G1303019 |
TU1486524 | lncRNA | upstream | 96875 | 50182921 ~ 50187125 (+) | True | LOC110490239 |
TU1486621 | lncRNA | downstream | 21468 | 50305647 ~ 50306222 (+) | True | G1303097 |
TU1486632 | lncRNA | downstream | 57593 | 50341772 ~ 50343909 (+) | True | G1303108 |
TU1486678 | lncRNA | downstream | 164300 | 50448479 ~ 50448734 (+) | True | G1303152 |
TU1486903 | lncRNA | downstream | 240714 | 50524893 ~ 50525189 (+) | True | G1303357 |
TU1486959 | lncRNA | downstream | 296912 | 50581091 ~ 50581245 (+) | True | G1303412 |
XM_021563509.2 | mRNA | upstream | 97875 | 50182820 ~ 50186125 (+) | False | LOC110490239 |
XM_021563504.2 | mRNA | upstream | 113735 | 50161944 ~ 50170265 (+) | True | LOC110490236 |
XR_005036316.1 | mRNA | upstream | 260172 | 50019617 ~ 50023828 (+) | True | LOC118938923 |
XM_021563501.2 | mRNA | upstream | 420300 | 49838523 ~ 49863700 (+) | True | LOC110490234 |
XM_036944521.1 | mRNA | upstream | 491292 | 49718800 ~ 49792708 (+) | True | foxp2 |
XM_021563522.2 | mRNA | downstream | 37170 | 50321349 ~ 50333454 (+) | False | cdkn1d |
XM_021563523.2 | mRNA | downstream | 37298 | 50321477 ~ 50333454 (+) | False | cdkn1d |
XM_021563521.2 | mRNA | downstream | 38442 | 50322621 ~ 50333454 (+) | False | cdkn1d |
XM_021563524.2 | mRNA | downstream | 39020 | 50323199 ~ 50333454 (+) | True | cdkn1d |
XM_021563526.2 | mRNA | downstream | 70656 | 50354835 ~ 50357815 (+) | True | LOC110490251 |
TU1486531 | other | upstream | 105435 | 50178274 ~ 50178565 (+) | True | G1303015 |
TU1485120 | other | upstream | 873687 | 49398458 ~ 49410313 (+) | True | LOC110490228 |
TU1485115 | other | upstream | 888142 | 49395223 ~ 49395858 (+) | False | G1301706 |
TU1484840 | other | upstream | 1353412 | 48930046 ~ 48930588 (+) | True | G1301458 |
TU1484559 | other | upstream | 1698737 | 48584707 ~ 48585263 (+) | True | G1301200 |
TU1486619 | other | downstream | 17266 | 50301445 ~ 50302351 (+) | True | G1303095 |
TU1486590 | other | downstream | 75031 | 50359210 ~ 50372207 (+) | True | LOC110490250 |
TU1487193 | other | downstream | 463183 | 50747362 ~ 50747715 (+) | True | G1303641 |
TU1487387 | other | downstream | 787646 | 51071825 ~ 51073294 (+) | True | G1303804 |
TU1487555 | other | downstream | 1015224 | 51299403 ~ 51299761 (+) | True | G1303950 |