Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1502139 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G1316598 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 63118737 ~ 63119851 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
63,117,200
63,117,600
63,118,000
63,118,400
63,118,800
63,119,200
63,119,600
63,120,000
63,120,400
63,120,400
63,120,800
63,121,200
63,121,600
63,122,000
63,122,400
63,122,800
63,123,200
63,123,600
NC_048579.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1502130 | lncRNA | upstream | 10213 | 63108291 ~ 63108524 (+) | True | G1316590 |
| TU1502113 | lncRNA | upstream | 42770 | 63075532 ~ 63075967 (+) | True | G1316576 |
| TU1502112 | lncRNA | upstream | 44462 | 63073895 ~ 63074275 (+) | True | G1316575 |
| TU1502070 | lncRNA | upstream | 100443 | 63016439 ~ 63018294 (+) | True | G1316544 |
| TU1501498 | lncRNA | upstream | 150638 | 62967868 ~ 62968099 (+) | True | G1316048 |
| TU1502170 | lncRNA | downstream | 65395 | 63185246 ~ 63185482 (+) | True | G1316627 |
| TU1502172 | lncRNA | downstream | 67913 | 63187764 ~ 63187987 (+) | True | G1316629 |
| TU1502174 | lncRNA | downstream | 69641 | 63189492 ~ 63189705 (+) | True | G1316631 |
| TU1502188 | lncRNA | downstream | 104942 | 63224793 ~ 63225047 (+) | True | G1316644 |
| TU1502160 | lncRNA | downstream | 113426 | 63233277 ~ 63233678 (+) | True | G1316618 |
| XM_021564005.2 | mRNA | upstream | 268445 | 62844136 ~ 62850292 (+) | True | LOC110490575 |
| XM_036944938.1 | mRNA | upstream | 301903 | 62792914 ~ 62816834 (+) | False | scyl2 |
| XM_036944940.1 | mRNA | upstream | 301903 | 62792914 ~ 62816834 (+) | False | scyl2 |
| XM_036944939.1 | mRNA | upstream | 301903 | 62792922 ~ 62816834 (+) | True | scyl2 |
| XM_021563995.2 | mRNA | upstream | 325998 | 62786627 ~ 62792739 (+) | False | depdc4 |
| XM_021564016.2 | mRNA | downstream | 178497 | 63298348 ~ 63327816 (+) | False | impdh1b |
| XM_021564017.2 | mRNA | downstream | 178509 | 63298360 ~ 63327816 (+) | False | impdh1b |
| XM_021564019.2 | mRNA | downstream | 181910 | 63301761 ~ 63327816 (+) | False | impdh1b |
| XM_021564022.2 | mRNA | downstream | 181911 | 63301762 ~ 63327816 (+) | False | impdh1b |
| XM_021564020.2 | mRNA | downstream | 181927 | 63301778 ~ 63327816 (+) | False | impdh1b |
| TU1501457 | other | upstream | 186215 | 62921704 ~ 62932522 (+) | True | G1316007 |
| TU1501289 | other | upstream | 503550 | 62614795 ~ 62615187 (+) | False | G1315860 |
| TU1501290 | other | upstream | 503550 | 62614795 ~ 62615187 (+) | True | G1315860 |
| TU1501058 | other | upstream | 643223 | 62415225 ~ 62475514 (+) | True | LOC110490567 |
| TU1501080 | other | upstream | 854721 | 62257134 ~ 62264016 (+) | True | G1315679 |
| TU1502275 | other | downstream | 264557 | 63384408 ~ 63385182 (+) | True | LOC110490586 |
| TU1502950 | other | downstream | 693989 | 63813840 ~ 63814369 (+) | True | G1317320 |
| TU1503377 | other | downstream | 1269755 | 64389606 ~ 64390097 (+) | True | G1317674 |
| TU1503390 | other | downstream | 1287158 | 64407009 ~ 64407811 (+) | False | G1317686 |
| TU1503391 | other | downstream | 1287158 | 64407009 ~ 64410034 (+) | True | G1317686 |
