RNA id: TU1504956



Basic Information


Item Value
RNA id TU1504956
length 257
lncRNA type intronic
GC content 0.49
exon number 2
gene id G1318867
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65277356 ~ 65277930 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgacagggtaggtccccactgtatgtgtttaccactatgacagggtaggtccccactgtatgtgttaaccactatgacagggtaggtccccactatgacagggtaggtccccactgtatgtgttaaccactatgacagggtaggtcccccactgtatgtgtttaccactatgacagggtatgtccccactgtatgtgttaaccactatgacagggtaggtccccactgtatgtgttaaccactatgacagggtaggt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1504544 lncRNA downstream 21492 65255487 ~ 65255864 (-) True G1318561
TU1504538 lncRNA downstream 43442 65229989 ~ 65233914 (-) True G1318555
TU1504531 lncRNA downstream 56493 65220441 ~ 65220863 (-) True G1318548
TU1504509 lncRNA downstream 116714 65160011 ~ 65160642 (-) True G1318529
TU1504424 lncRNA downstream 124069 65150518 ~ 65153287 (-) True G1318477
TU1505018 lncRNA upstream 156008 65433938 ~ 65434153 (-) True G1318925
TU1505019 lncRNA upstream 162158 65440088 ~ 65440350 (-) True G1318926
TU1505027 lncRNA upstream 190454 65468384 ~ 65468714 (-) True G1318934
TU1505034 lncRNA upstream 212108 65490038 ~ 65491611 (-) True G1318941
TU1505056 lncRNA upstream 237883 65515813 ~ 65517510 (-) True G1318958
XM_036945553.1 mRNA downstream 45693 65153383 ~ 65231663 (-) True LOC110513258
XM_036944969.1 mRNA downstream 218713 65021405 ~ 65058643 (-) True LOC118938827
XR_005036184.1 mRNA downstream 262945 64995972 ~ 65014411 (-) False LOC118938826
XM_036944971.1 mRNA upstream 600080 65878010 ~ 65891457 (-) False LOC110512490
XM_036944970.1 mRNA upstream 600080 65878010 ~ 65892365 (-) True LOC110512490
XM_036944972.1 mRNA upstream 614518 65892448 ~ 65898816 (-) False LOC110511373
XM_036944973.1 mRNA upstream 614518 65892448 ~ 65898816 (-) False LOC110511373
XM_036944974.1 mRNA upstream 614518 65892448 ~ 65898816 (-) False LOC110511373
TU1504423 other downstream 125956 65068277 ~ 65151400 (-) False G1318477
TU1504422 other downstream 125956 65084759 ~ 65151400 (-) False G1318477
TU1504148 other downstream 792038 64482827 ~ 64485318 (-) False LOC110499867
TU1504007 other downstream 1049681 64216504 ~ 64227675 (-) True G1318164
TU1503924 other downstream 1193468 64083037 ~ 64083888 (-) True G1318092
TU1505028 other upstream 192037 65469967 ~ 65473164 (-) True G1318935
TU1505596 other upstream 1001115 66279045 ~ 66282108 (-) True G1319357
TU1506125 other upstream 1530517 66808447 ~ 66895692 (-) False LOC110490781
TU1506127 other upstream 1578249 66856179 ~ 66862281 (-) True G1319781
TU1506128 other upstream 1585911 66863841 ~ 66867740 (-) True LOC110490781

Expression Profile