RNA id: TU1505019



Basic Information


Item Value
RNA id TU1505019
length 263
lncRNA type intronic
GC content 0.51
exon number 1
gene id G1318926
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65440088 ~ 65440350 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gagacagagagagagagagagagagagagagagagagacagagacagagacagagagagagagagagagagagagagagagagagagagagagacagagacagagacagagagagagagagagagagagagagagagagagagagacagagacagagagagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagggagagagagagagagagagagagag

Function


GO: NA

KEGG: NA

JBrowse2


Loading

Neighbor


RNA id RNA type direction distance location representative gene id
TU1505018 lncRNA downstream 5935 65433938 ~ 65434153 (-) True G1318925
TU1504956 lncRNA downstream 162158 65277356 ~ 65277930 (-) True G1318867
TU1504544 lncRNA downstream 184224 65255487 ~ 65255864 (-) True G1318561
TU1504538 lncRNA downstream 206174 65229989 ~ 65233914 (-) True G1318555
TU1504531 lncRNA downstream 219225 65220441 ~ 65220863 (-) True G1318548
TU1505027 lncRNA upstream 28034 65468384 ~ 65468714 (-) True G1318934
TU1505034 lncRNA upstream 49688 65490038 ~ 65491611 (-) True G1318941
TU1505056 lncRNA upstream 75463 65515813 ~ 65517510 (-) True G1318958
TU1505059 lncRNA upstream 84497 65524847 ~ 65525349 (-) True G1318961
TU1505062 lncRNA upstream 87146 65527496 ~ 65530244 (-) True G1318964
XM_036944967.1 mRNA downstream 136954 65268990 ~ 65303134 (-) False LOC110517393
XM_036944963.1 mRNA downstream 137260 65268990 ~ 65302828 (-) False LOC110517393
XM_036944964.1 mRNA downstream 137260 65268990 ~ 65302828 (-) False LOC110517393
XM_036944965.1 mRNA downstream 137260 65271107 ~ 65302828 (-) False LOC110517393
XM_036944966.1 mRNA downstream 137260 65272040 ~ 65302828 (-) True LOC110517393
XM_036944971.1 mRNA upstream 437660 65878010 ~ 65891457 (-) False LOC110512490
XM_036944970.1 mRNA upstream 437660 65878010 ~ 65892365 (-) True LOC110512490
XM_036944972.1 mRNA upstream 452098 65892448 ~ 65898816 (-) False LOC110511373
XM_036944973.1 mRNA upstream 452098 65892448 ~ 65898816 (-) False LOC110511373
XM_036944974.1 mRNA upstream 452098 65892448 ~ 65898816 (-) False LOC110511373
TU1504423 other downstream 288688 65068277 ~ 65151400 (-) False G1318477
TU1504422 other downstream 288688 65084759 ~ 65151400 (-) False G1318477
TU1504148 other downstream 954770 64482827 ~ 64485318 (-) False LOC110499867
TU1504007 other downstream 1212413 64216504 ~ 64227675 (-) True G1318164
TU1503924 other downstream 1356200 64083037 ~ 64083888 (-) True G1318092
TU1505028 other upstream 29617 65469967 ~ 65473164 (-) True G1318935
TU1505596 other upstream 838695 66279045 ~ 66282108 (-) True G1319357
TU1506125 other upstream 1368097 66808447 ~ 66895692 (-) False LOC110490781
TU1506127 other upstream 1415829 66856179 ~ 66862281 (-) True G1319781
TU1506128 other upstream 1423491 66863841 ~ 66867740 (-) True LOC110490781

Expression Profile


TU1505019 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

TU1505019 Expression in each Bioproject

Bar chart with 19 bars.
TU1505019 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.