RNA id: TU1505073


Basic Information

Item Value
RNA id TU1505073
length 555
lncRNA type intronic
GC content 0.41
exon number 2
gene id G1318975
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65547570 ~ 65548358 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTCTGGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACCAGCTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACCAGCTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGACCTGGTCTAATGTATAGGTTACACTAGTTACTACACTGGCCTGGTCTAATGTATAGGTTACCAAGGGTTACATATGAGAGTGAATGTCTAGAAATCCAGtgaaatccctccctccctccatccctccctccc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1505062 lncRNA downstream 17326 65527496 ~ 65530244 (-) True G1318964
TU1505059 lncRNA downstream 22221 65524847 ~ 65525349 (-) True G1318961
TU1505056 lncRNA downstream 30060 65515813 ~ 65517510 (-) True G1318958
TU1505034 lncRNA downstream 55959 65490038 ~ 65491611 (-) True G1318941
TU1505027 lncRNA downstream 78856 65468384 ~ 65468714 (-) True G1318934
TU1505074 lncRNA upstream 2921 65551279 ~ 65552443 (-) True G1318976
TU1505077 lncRNA upstream 4118 65552476 ~ 65577467 (-) True G1318979
TU1505097 lncRNA upstream 86834 65635192 ~ 65651956 (-) True G1318995
TU1505102 lncRNA upstream 98914 65647272 ~ 65648005 (-) True G1319000
TU1505117 lncRNA upstream 124845 65673203 ~ 65674398 (-) True G1319013
XM_036944967.1 mRNA downstream 244436 65268990 ~ 65303134 (-) False LOC110517393
XM_036944963.1 mRNA downstream 244742 65268990 ~ 65302828 (-) False LOC110517393
XM_036944964.1 mRNA downstream 244742 65268990 ~ 65302828 (-) False LOC110517393
XM_036944965.1 mRNA downstream 244742 65271107 ~ 65302828 (-) False LOC110517393
XM_036944966.1 mRNA downstream 244742 65272040 ~ 65302828 (-) True LOC110517393
XM_036944971.1 mRNA upstream 329652 65878010 ~ 65891457 (-) False LOC110512490
XM_036944970.1 mRNA upstream 329652 65878010 ~ 65892365 (-) True LOC110512490
XM_036944972.1 mRNA upstream 344090 65892448 ~ 65898816 (-) False LOC110511373
XM_036944973.1 mRNA upstream 344090 65892448 ~ 65898816 (-) False LOC110511373
XM_036944974.1 mRNA upstream 344090 65892448 ~ 65898816 (-) False LOC110511373
TU1505028 other downstream 74406 65469967 ~ 65473164 (-) True G1318935
TU1504423 other downstream 396170 65068277 ~ 65151400 (-) False G1318477
TU1504422 other downstream 396170 65084759 ~ 65151400 (-) False G1318477
TU1504148 other downstream 1062252 64482827 ~ 64485318 (-) False LOC110499867
TU1504007 other downstream 1319895 64216504 ~ 64227675 (-) True G1318164
TU1505596 other upstream 730687 66279045 ~ 66282108 (-) True G1319357
TU1506125 other upstream 1260089 66808447 ~ 66895692 (-) False LOC110490781
TU1506127 other upstream 1307821 66856179 ~ 66862281 (-) True G1319781
TU1506128 other upstream 1315483 66863841 ~ 66867740 (-) True LOC110490781
TU1506236 other upstream 1412593 66960951 ~ 66961304 (-) True G1319847

Expression Profile