RNA id: TU1505151



Basic Information


Item Value
RNA id TU1505151
length 364
lncRNA type intronic
GC content 0.59
exon number 2
gene id G1319047
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65738750 ~ 65739255 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agtgtctcctccctctcccctctgttctgagtgtctcctccctctcccctctgttctgagtgtctccctctcccctctgttctgagtgtctcctccctctcccctctgttctgagtgtctcctccctctcccctccgttctgagtgtctccctctcccctctgttctgaatgtctccctctcccctctgttctgagtgtctcctccctctcccctccgttctgagtgtctcctccctctcccctccgttctgagtgtctccctctcccctctgttctgagtgactcctccctctcccctccgttctgagtgtctccctctcccctctgttctgagtgtctcctccctctcccctctgttctgag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1505117 lncRNA downstream 64352 65673203 ~ 65674398 (-) True G1319013
TU1505097 lncRNA downstream 86794 65635192 ~ 65651956 (-) True G1318995
TU1505102 lncRNA downstream 90745 65647272 ~ 65648005 (-) True G1319000
TU1505077 lncRNA downstream 161283 65552476 ~ 65577467 (-) True G1318979
TU1505074 lncRNA downstream 186307 65551279 ~ 65552443 (-) True G1318976
TU1505203 lncRNA upstream 46995 65786250 ~ 65824644 (-) True G1319069
TU1505221 lncRNA upstream 77020 65816275 ~ 65816801 (-) True G1319084
TU1505269 lncRNA upstream 108268 65847523 ~ 65850192 (-) True G1319108
TU1505254 lncRNA upstream 120840 65860095 ~ 65863881 (-) True G1319095
TU1505253 lncRNA upstream 126958 65866213 ~ 65867735 (-) True G1319094
XM_036944967.1 mRNA downstream 435616 65268990 ~ 65303134 (-) False LOC110517393
XM_036944963.1 mRNA downstream 435922 65268990 ~ 65302828 (-) False LOC110517393
XM_036944964.1 mRNA downstream 435922 65268990 ~ 65302828 (-) False LOC110517393
XM_036944965.1 mRNA downstream 435922 65271107 ~ 65302828 (-) False LOC110517393
XM_036944966.1 mRNA downstream 435922 65272040 ~ 65302828 (-) True LOC110517393
XM_036944971.1 mRNA upstream 138755 65878010 ~ 65891457 (-) False LOC110512490
XM_036944970.1 mRNA upstream 138755 65878010 ~ 65892365 (-) True LOC110512490
XM_036944972.1 mRNA upstream 153193 65892448 ~ 65898816 (-) False LOC110511373
XM_036944973.1 mRNA upstream 153193 65892448 ~ 65898816 (-) False LOC110511373
XM_036944974.1 mRNA upstream 153193 65892448 ~ 65898816 (-) False LOC110511373
TU1505028 other downstream 265586 65469967 ~ 65473164 (-) True G1318935
TU1504423 other downstream 587350 65068277 ~ 65151400 (-) False G1318477
TU1504422 other downstream 587350 65084759 ~ 65151400 (-) False G1318477
TU1504148 other downstream 1253432 64482827 ~ 64485318 (-) False LOC110499867
TU1504007 other downstream 1511075 64216504 ~ 64227675 (-) True G1318164
TU1505596 other upstream 539790 66279045 ~ 66282108 (-) True G1319357
TU1506125 other upstream 1069192 66808447 ~ 66895692 (-) False LOC110490781
TU1506127 other upstream 1116924 66856179 ~ 66862281 (-) True G1319781
TU1506128 other upstream 1124586 66863841 ~ 66867740 (-) True LOC110490781
TU1506236 other upstream 1221696 66960951 ~ 66961304 (-) True G1319847

Expression Profile