RNA id: TU1505615



Basic Information


Item Value
RNA id TU1505615
length 205
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G1319369
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 66309789 ~ 66309993 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tatatatatatatatattttaggatATCTATATGTATATTTGACACTCACTTATCTAGTGGGGAATACATTGATGGTGAAGAGGAACATAGAGGGTTAGTGGctgaggaagaagagaaggagagagagaaggacagtaaataaaggcttggtgggtgaggaagaagagaaggagagagagaaggacagtaaataaaggcttggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1505609 lncRNA downstream 5352 66303919 ~ 66304437 (-) False G1319366
TU1505606 lncRNA downstream 5352 66304003 ~ 66304437 (-) False G1319366
TU1505608 lncRNA downstream 5431 66302835 ~ 66304358 (-) False G1319366
TU1505612 lncRNA downstream 5431 66303919 ~ 66304358 (-) False G1319366
TU1505610 lncRNA downstream 5431 66304003 ~ 66304358 (-) True G1319366
TU1505617 lncRNA upstream 1034 66311027 ~ 66311450 (-) True G1319371
TU1505619 lncRNA upstream 7800 66317793 ~ 66318138 (-) True G1319373
TU1505620 lncRNA upstream 8777 66318770 ~ 66319005 (-) True G1319374
TU1505647 lncRNA upstream 70204 66380197 ~ 66380647 (-) True G1319399
TU1505654 lncRNA upstream 93544 66403537 ~ 66404855 (-) True G1319406
XM_036944994.1 mRNA downstream 261890 66033061 ~ 66047899 (-) True LOC110499708
XM_036944993.1 mRNA downstream 261891 66033061 ~ 66047898 (-) False LOC110499708
XM_036944990.1 mRNA downstream 300323 65987932 ~ 66009466 (-) False LOC110500955
XR_005036194.1 mRNA upstream 103342 66413335 ~ 66416152 (-) False LOC110519161
XM_036945007.1 mRNA upstream 107461 66417454 ~ 66513524 (-) False LOC118938831
XM_036945008.1 mRNA upstream 107461 66417454 ~ 66513524 (-) True LOC118938831
XM_036945009.1 mRNA upstream 209725 66519718 ~ 66553585 (-) False LOC110515929
XM_036945556.1 mRNA upstream 254925 66564918 ~ 66630601 (-) False LOC110519130
TU1505596 other downstream 27681 66279045 ~ 66282108 (-) True G1319357
TU1505028 other downstream 836625 65469967 ~ 65473164 (-) True G1318935
TU1504423 other downstream 1158389 65068277 ~ 65151400 (-) False G1318477
TU1504422 other downstream 1158389 65084759 ~ 65151400 (-) False G1318477
TU1504148 other downstream 1824471 64482827 ~ 64485318 (-) False LOC110499867
TU1506125 other upstream 498454 66808447 ~ 66895692 (-) False LOC110490781
TU1506127 other upstream 546186 66856179 ~ 66862281 (-) True G1319781
TU1506128 other upstream 553848 66863841 ~ 66867740 (-) True LOC110490781
TU1506236 other upstream 650958 66960951 ~ 66961304 (-) True G1319847
TU1506555 other upstream 770788 67080781 ~ 67084605 (-) True LOC110511902

Expression Profile