RNA id: TU1506127


Basic Information

Item Value
RNA id TU1506127
length 1693
RNA type TUCP
GC content 0.40
exon number 3
gene id G1319781
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 66856179 ~ 66862281 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

atataaccctgacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacatttctgatcgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgattgatataactctaacccttctcagcagtatcgtaacttttctgattgatataacccttctcagcagtatcgtaacttttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgatcggtataaccctaacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgattgatataaccctaacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaatgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtattgtaatgtttctgattgatataaccctaacccttctcaacagtatcgtaacgtttctgattgatataaccctaacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtattgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgattgatataaccctaacccttctcagcagtatcgtaacgtttctgattgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtattgtaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttttgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgatcgatataacccttctcagcagtatcgcaacgtttctgatcgatataaccctaacccttctcagcagtatcgtaacgtttctgat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1506154 lncRNA downstream 26860 66820432 ~ 66829319 (-) True G1319803
TU1506126 lncRNA downstream 43055 66808447 ~ 66813124 (-) False LOC110490781
TU1506141 lncRNA downstream 64178 66788845 ~ 66792001 (-) True G1319793
TU1505944 lncRNA downstream 193261 66655198 ~ 66662918 (-) True LOC110501008
TU1505914 lncRNA downstream 217554 66629402 ~ 66638625 (-) True LOC110519130
TU1506170 lncRNA upstream 7013 66869294 ~ 66884898 (-) False G1319818
TU1506181 lncRNA upstream 7699 66869980 ~ 66878663 (-) False G1319818
TU1506194 lncRNA upstream 8135 66870416 ~ 66872828 (-) True G1319820
TU1506173 lncRNA upstream 9376 66871657 ~ 66882680 (-) False G1319818
TU1506175 lncRNA upstream 13582 66875863 ~ 66882680 (-) False G1319818
XM_036945010.1 mRNA downstream 143147 66655198 ~ 66713032 (-) False LOC110501008
XM_036945556.1 mRNA downstream 225578 66564918 ~ 66630601 (-) False LOC110519130
XM_036945009.1 mRNA downstream 302594 66519718 ~ 66553585 (-) False LOC110515929
XM_036945007.1 mRNA downstream 342655 66417454 ~ 66513524 (-) False LOC118938831
XM_036945011.1 mRNA upstream 61761 66924042 ~ 66940668 (-) False LOC110490597
XM_036945012.1 mRNA upstream 61761 66924042 ~ 66940668 (-) False LOC110490597
XR_005036195.1 mRNA upstream 61761 66924042 ~ 66940668 (-) False LOC110490597
XR_005036196.1 mRNA upstream 61762 66924043 ~ 66940668 (-) False LOC110490597
XR_005036197.1 mRNA upstream 62463 66924744 ~ 66940668 (-) True LOC110490597
TU1505596 other downstream 574071 66279045 ~ 66282108 (-) True G1319357
TU1505028 other downstream 1383015 65469967 ~ 65473164 (-) True G1318935
TU1504423 other downstream 1704779 65068277 ~ 65151400 (-) False G1318477
TU1504422 other downstream 1704779 65084759 ~ 65151400 (-) False G1318477
TU1504148 other downstream 2370861 64482827 ~ 64485318 (-) False LOC110499867
TU1506128 other upstream 1560 66863841 ~ 66867740 (-) True LOC110490781
TU1506236 other upstream 98670 66960951 ~ 66961304 (-) True G1319847
TU1506555 other upstream 218500 67080781 ~ 67084605 (-) True LOC110511902
TU1506612 other upstream 330835 67193116 ~ 67193493 (-) True G1320139
TU1507110 other upstream 930744 67793025 ~ 67797835 (-) True LOC118938833

Expression Profile