RNA id: TU1506631



Basic Information


Item Value
RNA id TU1506631
length 203
lncRNA type intronic
GC content 0.40
exon number 1
gene id G1320152
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 67230202 ~ 67230404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctctctgtctctctctctctctcactttctctctgtttctctctctctctctctctctcactttctctctctgtctctctgtctctctttgactAAGCCCATTAGACATGGCTGTGTTATGTAACTGTTGTgctatgcttgtgtgtgtgtgtgtgtgtttatacagaAACTGTGtatattattgtgtgtgtatatatactgta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1506630 lncRNA downstream 714 67229272 ~ 67229488 (-) True G1320151
TU1506629 lncRNA downstream 1517 67228466 ~ 67228685 (-) True G1320150
TU1506620 lncRNA downstream 9719 67220169 ~ 67220483 (-) True G1320147
TU1506616 lncRNA downstream 15990 67213967 ~ 67214212 (-) True G1320143
TU1506608 lncRNA downstream 46918 67182844 ~ 67183284 (-) True G1320135
TU1506643 lncRNA upstream 24673 67255077 ~ 67255395 (-) True G1320164
TU1506644 lncRNA upstream 25627 67256031 ~ 67257190 (-) True G1320165
TU1506665 lncRNA upstream 58452 67288856 ~ 67302039 (-) True G1320183
TU1506674 lncRNA upstream 66807 67297211 ~ 67298114 (-) True G1320190
TU1506715 lncRNA upstream 130124 67360528 ~ 67360927 (-) True G1320230
XM_036945033.1 mRNA downstream 145507 67079306 ~ 67084695 (-) False LOC110511902
XM_036945032.1 mRNA downstream 145508 67079306 ~ 67084694 (-) False LOC110511902
XM_036945030.1 mRNA downstream 154568 67072008 ~ 67075634 (-) False LOC118938832
XM_036945031.1 mRNA downstream 154568 67072164 ~ 67075634 (-) True LOC118938832
XM_036945029.1 mRNA downstream 154569 67071314 ~ 67075633 (-) False LOC118938832
XM_036945043.1 mRNA upstream 140978 67371382 ~ 67378234 (-) False LOC110499840
XM_036945042.1 mRNA upstream 140978 67371382 ~ 67378569 (-) False LOC110499840
XM_036945044.1 mRNA upstream 140978 67371382 ~ 67378591 (-) False LOC110499840
XM_036945045.1 mRNA upstream 140978 67371382 ~ 67378695 (-) True LOC110499840
XM_036945060.1 mRNA upstream 554813 67785217 ~ 67797863 (-) False LOC118938833
TU1506612 other downstream 36709 67193116 ~ 67193493 (-) True G1320139
TU1506555 other downstream 145597 67080781 ~ 67084605 (-) True LOC110511902
TU1506236 other downstream 268898 66960951 ~ 66961304 (-) True G1319847
TU1506128 other downstream 362462 66863841 ~ 66867740 (-) True LOC110490781
TU1506127 other downstream 367921 66856179 ~ 66862281 (-) True G1319781
TU1507110 other upstream 562621 67793025 ~ 67797835 (-) True LOC118938833
TU1508038 other upstream 841997 68072401 ~ 68176382 (-) True LOC110513021
TU1508586 other upstream 1800622 69031026 ~ 69073276 (-) False G1321652
TU1508651 other upstream 1925122 69155526 ~ 69156999 (-) True LOC110490790
TU1508670 other upstream 1989899 69220303 ~ 69223028 (-) True G1321729

Expression Profile