RNA id: TU1508181



Basic Information


Item Value
RNA id TU1508181
length 210
lncRNA type intronic
GC content 0.50
exon number 2
gene id G1321359
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 68189643 ~ 68190139 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TAGCCGTCCTGTTTAGACAGTTCCCCAGACTGTACTGTCTTTAGCCGTCCTGTTTAGACAGTTCCCCAGACTGTGCTGTCTTTAGCCGTCCTATTTAGACAGTCCCCCAGACTGTACTGTCTTTAGCCGTCCTATTTAGACAGTCCCCCAGACTGTACTGTCTTTAGCCGTCCTGTTTAGACAGTTCCCCAGACTGTGCTGTCTTTAGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1508174 lncRNA downstream 8161 68181280 ~ 68181482 (-) True G1321353
TU1508173 lncRNA downstream 8659 68180652 ~ 68180984 (-) True G1321352
TU1508162 lncRNA downstream 32399 68156884 ~ 68157244 (-) True G1321341
TU1508149 lncRNA downstream 55054 68133595 ~ 68134589 (-) False G1321333
TU1508151 lncRNA downstream 55054 68133595 ~ 68134589 (-) True G1321333
TU1508186 lncRNA upstream 2215 68192354 ~ 68192782 (-) True G1321363
TU1508188 lncRNA upstream 7179 68197318 ~ 68197549 (-) True G1321365
TU1508191 lncRNA upstream 14012 68204151 ~ 68205233 (-) True G1321368
TU1508194 lncRNA upstream 16318 68206457 ~ 68207079 (-) False G1321370
TU1508195 lncRNA upstream 16318 68206457 ~ 68207452 (-) True G1321370
XM_036945076.1 mRNA downstream 191722 67966234 ~ 67997921 (-) True LOC110500996
XM_036945074.1 mRNA downstream 191723 67966234 ~ 67997920 (-) False LOC110500996
XM_036945075.1 mRNA downstream 191725 67966234 ~ 67997918 (-) False LOC110500996
XM_036945077.1 mRNA downstream 192025 67966234 ~ 67997618 (-) False LOC110500996
XM_036945070.1 mRNA downstream 267592 67810583 ~ 67922051 (-) False LOC110501000
XM_036945094.1 mRNA upstream 894666 69084805 ~ 69114891 (-) False LOC110490613
XM_036945095.1 mRNA upstream 894666 69084805 ~ 69114891 (-) True LOC110490613
XM_036945097.1 mRNA upstream 928638 69118777 ~ 69127449 (-) False LOC110490606
XM_036945096.1 mRNA upstream 928638 69118777 ~ 69127452 (-) False LOC110490606
XM_036945099.1 mRNA upstream 959338 69149477 ~ 69162598 (-) False LOC110490790
TU1508038 other downstream 13261 68072401 ~ 68176382 (-) True LOC110513021
TU1507110 other downstream 391808 67793025 ~ 67797835 (-) True LOC118938833
TU1506612 other downstream 996150 67193116 ~ 67193493 (-) True G1320139
TU1506555 other downstream 1105038 67080781 ~ 67084605 (-) True LOC110511902
TU1506236 other downstream 1228339 66960951 ~ 66961304 (-) True G1319847
TU1508586 other upstream 840887 69031026 ~ 69073276 (-) False G1321652
TU1508651 other upstream 965387 69155526 ~ 69156999 (-) True LOC110490790
TU1508670 other upstream 1030164 69220303 ~ 69223028 (-) True G1321729
TU1509018 other upstream 1372171 69562310 ~ 69563040 (-) True G1321997
TU1509441 other upstream 1708546 69898685 ~ 69899703 (-) True G1322348

Expression Profile