RNA id: TU1508431



Basic Information


Item Value
RNA id TU1508431
length 204
lncRNA type intronic
GC content 0.50
exon number 1
gene id G1321533
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 68627449 ~ 68627652 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ctccactctctctccctctcttcctacgCCAGAGTAGCAGTCTAGTGTAGAGAGAGGGTGTGTTGTAGGGCCTGTTAGCTTTAAAAACAGAGAGTAACTCCTTGCAGAAGTGTTGGCAGATATCAGCAGCggcctgtcactctctctctctgctctctctctctctctctgctctctatctctttctctctctctcactctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1508430 lncRNA downstream 4829 68622222 ~ 68622620 (-) True G1321532
TU1508419 lncRNA downstream 33183 68593922 ~ 68594266 (-) True G1321521
TU1508417 lncRNA downstream 37745 68589480 ~ 68589704 (-) True G1321519
TU1508415 lncRNA downstream 41695 68585410 ~ 68585754 (-) True G1321517
TU1508410 lncRNA downstream 47203 68579970 ~ 68580246 (-) True G1321512
TU1508434 lncRNA upstream 8535 68636187 ~ 68636663 (-) True G1321536
TU1508436 lncRNA upstream 15973 68643625 ~ 68644097 (-) True G1321538
TU1508437 lncRNA upstream 25009 68652661 ~ 68654125 (-) True G1321539
TU1508462 lncRNA upstream 80704 68708356 ~ 68723387 (-) True G1321561
TU1508470 lncRNA upstream 136513 68764165 ~ 68764462 (-) True G1321567
XM_036945079.1 mRNA downstream 387512 67998532 ~ 68239937 (-) False LOC110513021
XM_036945076.1 mRNA downstream 629528 67966234 ~ 67997921 (-) True LOC110500996
XM_036945074.1 mRNA downstream 629529 67966234 ~ 67997920 (-) False LOC110500996
XM_036945075.1 mRNA downstream 629531 67966234 ~ 67997918 (-) False LOC110500996
XM_036945077.1 mRNA downstream 629831 67966234 ~ 67997618 (-) False LOC110500996
XM_036945094.1 mRNA upstream 457153 69084805 ~ 69114891 (-) False LOC110490613
XM_036945095.1 mRNA upstream 457153 69084805 ~ 69114891 (-) True LOC110490613
XM_036945097.1 mRNA upstream 491125 69118777 ~ 69127449 (-) False LOC110490606
XM_036945096.1 mRNA upstream 491125 69118777 ~ 69127452 (-) False LOC110490606
XM_036945099.1 mRNA upstream 521825 69149477 ~ 69162598 (-) False LOC110490790
TU1508038 other downstream 451067 68072401 ~ 68176382 (-) True LOC110513021
TU1507110 other downstream 829614 67793025 ~ 67797835 (-) True LOC118938833
TU1506612 other downstream 1433956 67193116 ~ 67193493 (-) True G1320139
TU1506555 other downstream 1542844 67080781 ~ 67084605 (-) True LOC110511902
TU1506236 other downstream 1666145 66960951 ~ 66961304 (-) True G1319847
TU1508586 other upstream 403374 69031026 ~ 69073276 (-) False G1321652
TU1508651 other upstream 527874 69155526 ~ 69156999 (-) True LOC110490790
TU1508670 other upstream 592651 69220303 ~ 69223028 (-) True G1321729
TU1509018 other upstream 934658 69562310 ~ 69563040 (-) True G1321997
TU1509441 other upstream 1271033 69898685 ~ 69899703 (-) True G1322348

Expression Profile