RNA id: TU1508483



Basic Information


Item Value
RNA id TU1508483
length 203
lncRNA type intronic
GC content 0.46
exon number 1
gene id G1321580
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 68790697 ~ 68790899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATACAGGAAAACAAGGCTTTCTGTCTTGGGTGGAGAGATACAGGAAACAGGGATTTCTGTCTTGGTGGAGGGATACAGGAAAACAAGGCTTTCTGTCTAGGGTGGAGAGAACCAGGGAACTGGGATTTCTGTCTTGGTGGAGGGATACAGGAAAACAAGGCTTTCTGTCTTGGTTGGAGAGATACAGGAAAACAAGGCTTTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1508482 lncRNA downstream 543 68789644 ~ 68790154 (-) True G1321579
TU1508479 lncRNA downstream 2415 68788072 ~ 68788282 (-) True G1321576
TU1508478 lncRNA downstream 6178 68784268 ~ 68784519 (-) True G1321575
TU1508474 lncRNA downstream 14080 68776381 ~ 68776617 (-) True G1321571
TU1508470 lncRNA downstream 26235 68764165 ~ 68764462 (-) True G1321567
TU1508485 lncRNA upstream 2700 68793599 ~ 68793807 (-) True G1321582
TU1508544 lncRNA upstream 128491 68919390 ~ 68921094 (-) True G1321622
TU1508569 lncRNA upstream 193817 68984716 ~ 68985821 (-) True G1321643
TU1508591 lncRNA upstream 214427 69005326 ~ 69036033 (-) True G1321657
TU1508602 lncRNA upstream 238809 69029708 ~ 69030509 (-) True G1321668
XM_036945079.1 mRNA downstream 550760 67998532 ~ 68239937 (-) False LOC110513021
XM_036945076.1 mRNA downstream 792776 67966234 ~ 67997921 (-) True LOC110500996
XM_036945074.1 mRNA downstream 792777 67966234 ~ 67997920 (-) False LOC110500996
XM_036945075.1 mRNA downstream 792779 67966234 ~ 67997918 (-) False LOC110500996
XM_036945077.1 mRNA downstream 793079 67966234 ~ 67997618 (-) False LOC110500996
XM_036945094.1 mRNA upstream 293906 69084805 ~ 69114891 (-) False LOC110490613
XM_036945095.1 mRNA upstream 293906 69084805 ~ 69114891 (-) True LOC110490613
XM_036945097.1 mRNA upstream 327878 69118777 ~ 69127449 (-) False LOC110490606
XM_036945096.1 mRNA upstream 327878 69118777 ~ 69127452 (-) False LOC110490606
XM_036945099.1 mRNA upstream 358578 69149477 ~ 69162598 (-) False LOC110490790
TU1508038 other downstream 614315 68072401 ~ 68176382 (-) True LOC110513021
TU1507110 other downstream 992862 67793025 ~ 67797835 (-) True LOC118938833
TU1506612 other downstream 1597204 67193116 ~ 67193493 (-) True G1320139
TU1506555 other downstream 1706092 67080781 ~ 67084605 (-) True LOC110511902
TU1506236 other downstream 1829393 66960951 ~ 66961304 (-) True G1319847
TU1508586 other upstream 240127 69031026 ~ 69073276 (-) False G1321652
TU1508651 other upstream 364627 69155526 ~ 69156999 (-) True LOC110490790
TU1508670 other upstream 429404 69220303 ~ 69223028 (-) True G1321729
TU1509018 other upstream 771411 69562310 ~ 69563040 (-) True G1321997
TU1509441 other upstream 1107786 69898685 ~ 69899703 (-) True G1322348

Expression Profile