RNA id: TU1509018


Basic Information

Item Value
RNA id TU1509018
length 467
RNA type TUCP
GC content 0.40
exon number 2
gene id G1321997
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 69562310 ~ 69563040 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtttaatgtcgattgctcatgtttcttggccgaagcaagtctcttcttattattggtgtcttttagtagtggtttctttgcagcaatttgaccatgaaggcctgattcacgcagtctccgctgaacagttgatgttgagatgtgtctgttacttgaactatgtgaagcatttatttgggctgcaatttctgaggctggtaactgtaatgaacttattctctgcagcagaggtaactgtaatgaacttatcctctacagcagaagtaactctaatgaacttatcctctgtagcagaggtaactctaatgaacttatcctctgtagcagaggtaactctaatgaacttatcctctgtagcagaggtaactctaatgaacttatcctctgcagcagaggtaactgtaatgaacttatcctctacagcagaggtaactctaatgaacttatcttctgcagcagaggtaact

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1509016 lncRNA downstream 293 69561654 ~ 69562017 (-) True G1321995
TU1509015 lncRNA downstream 1167 69560816 ~ 69561143 (-) True G1321994
TU1509009 lncRNA downstream 10775 69551139 ~ 69551535 (-) True G1321988
TU1508999 lncRNA downstream 20723 69541047 ~ 69541587 (-) True G1321978
TU1508954 lncRNA downstream 56575 69447983 ~ 69505735 (-) True G1321939
TU1509261 lncRNA upstream 1317 69564357 ~ 69564706 (-) True G1322201
TU1509266 lncRNA upstream 9449 69572489 ~ 69573256 (-) True G1322206
TU1509271 lncRNA upstream 39917 69602957 ~ 69603224 (-) True G1322211
TU1509272 lncRNA upstream 41412 69604452 ~ 69604756 (-) True G1322212
TU1509273 lncRNA upstream 44305 69607345 ~ 69608098 (-) True G1322213
XM_036945116.1 mRNA downstream 36182 69513903 ~ 69526128 (-) True LOC110511775
XM_036945115.1 mRNA downstream 36212 69513903 ~ 69526098 (-) False LOC110511775
XM_036945122.1 mRNA downstream 48907 69502537 ~ 69513403 (-) True LOC110500968
XM_036945114.1 mRNA downstream 131502 69424840 ~ 69430808 (-) True LOC110499783
XM_036945112.1 mRNA downstream 145245 69337702 ~ 69417065 (-) False LOC110490621
XR_005036200.1 mRNA upstream 46705 69609745 ~ 69610345 (-) True LOC110499763
XM_036945124.1 mRNA upstream 48583 69611623 ~ 69614219 (-) True LOC118936535
XM_036945125.1 mRNA upstream 55928 69618968 ~ 69640826 (-) False LOC110499760
XM_036945127.1 mRNA upstream 55928 69618968 ~ 69640826 (-) False LOC110499760
XM_036945129.1 mRNA upstream 55928 69618968 ~ 69640826 (-) False LOC110499760
TU1508670 other downstream 339282 69220303 ~ 69223028 (-) True G1321729
TU1508651 other downstream 405311 69155526 ~ 69156999 (-) True LOC110490790
TU1508586 other downstream 489034 69031026 ~ 69073276 (-) False G1321652
TU1508038 other downstream 1385928 68072401 ~ 68176382 (-) True LOC110513021
TU1507110 other downstream 1764475 67793025 ~ 67797835 (-) True LOC118938833
TU1509441 other upstream 335645 69898685 ~ 69899703 (-) True G1322348
TU1510302 other upstream 973412 70536452 ~ 70537139 (-) True G1323036
TU1510280 other upstream 980316 70543356 ~ 70545220 (-) True LOC110490645
TU1510499 other upstream 1462211 71025251 ~ 71039522 (-) True G1323207
TU1510608 other upstream 1639460 71202500 ~ 71237846 (-) False G1323296

Expression Profile