RNA id: TU1510367


Basic Information

Item Value
RNA id TU1510367
length 269
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G1323088
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70712968 ~ 70713236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtggactcactaaacagagaacatccctggtcatctctactacccctgatctggaggactcactaaacagagaacatccctggtcatccctactgcctctgatctggcagactcactaaacagagaacatccctggtcatccctactgcctctgatctggaggactcactaaacagagaacatccctggtcatccctactgcctctgatctggaggtctcactaaacagagaacatccctgttcatccctactgcctctgatctggtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1510364 lncRNA downstream 7548 70705110 ~ 70705420 (-) True G1323085
TU1510362 lncRNA downstream 10509 70702047 ~ 70702459 (-) True G1323083
TU1510361 lncRNA downstream 14718 70697945 ~ 70698250 (-) True G1323082
TU1510334 lncRNA downstream 21216 70652058 ~ 70691752 (-) True G1323063
TU1510308 lncRNA downstream 129892 70582174 ~ 70583076 (-) True G1323042
TU1510368 lncRNA upstream 489 70713725 ~ 70714465 (-) True G1323089
TU1510369 lncRNA upstream 2753 70715989 ~ 70716422 (-) True G1323090
TU1510370 lncRNA upstream 4374 70717610 ~ 70718073 (-) True G1323091
TU1510373 lncRNA upstream 15662 70728898 ~ 70729277 (-) True G1323094
TU1510381 lncRNA upstream 17772 70731008 ~ 70733279 (-) True G1323101
XM_036945190.1 mRNA downstream 63932 70644164 ~ 70649036 (-) True LOC118938838
XM_036945166.1 mRNA downstream 106819 70593116 ~ 70606149 (-) True LOC110490633
XM_036945167.1 mRNA downstream 106820 70593116 ~ 70606148 (-) False LOC110490633
XM_036945168.1 mRNA downstream 120291 70583258 ~ 70592677 (-) True LOC110490634
XM_036945174.1 mRNA downstream 124427 70574105 ~ 70588541 (-) True LOC110490800
XM_036945195.1 mRNA upstream 20126 70733362 ~ 70755356 (-) False LOC118936248
XM_036945196.1 mRNA upstream 20126 70733362 ~ 70755356 (-) False LOC118936248
XM_036945194.1 mRNA upstream 20946 70734182 ~ 70755355 (-) False LOC118936248
XM_021564110.2 mRNA upstream 49741 70762977 ~ 70775712 (-) False LOC110490643
XM_036945191.1 mRNA upstream 49741 70762977 ~ 70776163 (-) False LOC110490643
TU1510280 other downstream 167748 70543356 ~ 70545220 (-) True LOC110490645
TU1510302 other downstream 175829 70536452 ~ 70537139 (-) True G1323036
TU1509441 other downstream 813265 69898685 ~ 69899703 (-) True G1322348
TU1509018 other downstream 1149928 69562310 ~ 69563040 (-) True G1321997
TU1508670 other downstream 1489940 69220303 ~ 69223028 (-) True G1321729
TU1510499 other upstream 312015 71025251 ~ 71039522 (-) True G1323207
TU1510608 other upstream 489264 71202500 ~ 71237846 (-) False G1323296
TU1510607 other upstream 489504 71202740 ~ 71237846 (-) True G1323296
TU1511211 other upstream 1144047 71857283 ~ 71922908 (-) True LOC118938840
TU1512018 other upstream 1334728 72047964 ~ 72050171 (-) False LOC110500989

Expression Profile