RNA id: TU1510760



Basic Information


Item Value
RNA id TU1510760
length 279
lncRNA type intronic
GC content 0.30
exon number 2
gene id G1323425
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71379888 ~ 71380303 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTATTTcctcatcattacaacactgtatatagacatactaTGACAttggaaatgtctttattcttttgtaacttttttaagtgtaatgttaactgttaATTTTATATTGTTTATCACACttttgttaacatatgtttcccatgccaataaagccccttaaattgaattgacagagagacagagacagagacagagagagaaagaaagaaagaaagagagagagagagacacacacacagagagaaagaaataaaaaagaaagaaagaaagaaagaaaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1510734 lncRNA downstream 41129 71338180 ~ 71338759 (-) True G1323404
TU1510732 lncRNA downstream 43786 71335480 ~ 71336102 (-) True G1323402
TU1510711 lncRNA downstream 81634 71297753 ~ 71298254 (-) True G1323381
TU1510641 lncRNA downstream 110205 71269451 ~ 71269683 (-) True G1323319
TU1510623 lncRNA downstream 133684 71246002 ~ 71246204 (-) True G1323309
TU1510753 lncRNA upstream 7852 71388155 ~ 71390459 (-) False G1323422
TU1510756 lncRNA upstream 9578 71389881 ~ 71390459 (-) True G1323422
TU1510768 lncRNA upstream 21773 71402076 ~ 71402486 (-) True G1323433
TU1510770 lncRNA upstream 22427 71402730 ~ 71403078 (-) True G1323435
TU1510779 lncRNA upstream 35616 71415919 ~ 71416316 (-) True G1323443
XM_036945560.1 mRNA downstream 108716 71270357 ~ 71271172 (-) True LOC118938900
XM_036945591.1 mRNA downstream 116306 71247916 ~ 71263582 (-) True LOC118938931
XM_021564168.2 mRNA downstream 141993 71232979 ~ 71237895 (-) True LOC110490709
XM_036945209.1 mRNA downstream 147759 71228868 ~ 71232129 (-) True LOC110490707
XM_021564166.2 mRNA downstream 147760 71228868 ~ 71232128 (-) False LOC110490707
XM_036945225.1 mRNA upstream 307577 71687880 ~ 71734050 (-) False LOC110490714
XM_036945227.1 mRNA upstream 307577 71687880 ~ 71734271 (-) False LOC110490714
XM_036945223.1 mRNA upstream 307577 71687880 ~ 71734313 (-) False LOC110490714
XM_036945228.1 mRNA upstream 307577 71687880 ~ 71734385 (-) False LOC110490714
XM_036945224.1 mRNA upstream 307577 71687880 ~ 71734394 (-) False LOC110490714
TU1510608 other downstream 142042 71202500 ~ 71237846 (-) False G1323296
TU1510607 other downstream 142042 71202740 ~ 71237846 (-) True G1323296
TU1510499 other downstream 340366 71025251 ~ 71039522 (-) True G1323207
TU1510280 other downstream 834668 70543356 ~ 70545220 (-) True LOC110490645
TU1510302 other downstream 842749 70536452 ~ 70537139 (-) True G1323036
TU1511211 other upstream 476980 71857283 ~ 71922908 (-) True LOC118938840
TU1512018 other upstream 667661 72047964 ~ 72050171 (-) False LOC110500989
TU1512017 other upstream 676800 72057103 ~ 72150937 (-) True LOC110500989
TU1512083 other upstream 784330 72164633 ~ 72168158 (-) True LOC110490626
TU1512124 other upstream 860245 72240548 ~ 72260352 (-) False G1324464

Expression Profile