RNA id: TU1510800



Basic Information


Item Value
RNA id TU1510800
length 369
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G1323464
representative False

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71443603 ~ 71444963 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cacctctctggtgtttaggttgtaacccataataaatactgttgtacagcacctctctggtgtttaggttgtaacccataataaatactgttgtaaagcacctctctggtgtttaggttgtaacccataataaatactgttgtaaagcacctctctggtgtttaggttgtaacccataataaatactgttgtacagcacctctctggtgtttaggttgtaacccataataaatactgttgtacagcacctctctggtgtttaggttgtaacccataataaatactgttgtacagcacctctctggtgtttaggttgtaacccataataaatacGTGAcgaggttcaaatcaaatcaaatacaattggTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1510780 lncRNA downstream 24623 71418576 ~ 71418980 (-) True G1323444
TU1510779 lncRNA downstream 27287 71415919 ~ 71416316 (-) True G1323443
TU1510770 lncRNA downstream 40525 71402730 ~ 71403078 (-) True G1323435
TU1510768 lncRNA downstream 41117 71402076 ~ 71402486 (-) True G1323433
TU1510753 lncRNA downstream 53144 71388155 ~ 71390459 (-) False G1323422
TU1510803 lncRNA upstream 1113 71445574 ~ 71445885 (-) True G1323465
TU1510807 lncRNA upstream 8116 71452577 ~ 71453082 (-) True G1323469
TU1510808 lncRNA upstream 8731 71453192 ~ 71453426 (-) True G1323470
TU1510855 lncRNA upstream 33687 71478148 ~ 71478376 (-) True G1323506
TU1510867 lncRNA upstream 45599 71490060 ~ 71490342 (-) True G1323511
XM_036945560.1 mRNA downstream 172431 71270357 ~ 71271172 (-) True LOC118938900
XM_036945591.1 mRNA downstream 180021 71247916 ~ 71263582 (-) True LOC118938931
XM_021564168.2 mRNA downstream 205708 71232979 ~ 71237895 (-) True LOC110490709
XM_036945209.1 mRNA downstream 211474 71228868 ~ 71232129 (-) True LOC110490707
XM_021564166.2 mRNA downstream 211475 71228868 ~ 71232128 (-) False LOC110490707
XM_036945225.1 mRNA upstream 243419 71687880 ~ 71734050 (-) False LOC110490714
XM_036945227.1 mRNA upstream 243419 71687880 ~ 71734271 (-) False LOC110490714
XM_036945223.1 mRNA upstream 243419 71687880 ~ 71734313 (-) False LOC110490714
XM_036945228.1 mRNA upstream 243419 71687880 ~ 71734385 (-) False LOC110490714
XM_036945224.1 mRNA upstream 243419 71687880 ~ 71734394 (-) False LOC110490714
TU1510608 other downstream 205757 71202500 ~ 71237846 (-) False G1323296
TU1510607 other downstream 205757 71202740 ~ 71237846 (-) True G1323296
TU1510499 other downstream 404081 71025251 ~ 71039522 (-) True G1323207
TU1510280 other downstream 898383 70543356 ~ 70545220 (-) True LOC110490645
TU1510302 other downstream 906464 70536452 ~ 70537139 (-) True G1323036
TU1511211 other upstream 412822 71857283 ~ 71922908 (-) True LOC118938840
TU1512018 other upstream 603503 72047964 ~ 72050171 (-) False LOC110500989
TU1512017 other upstream 612642 72057103 ~ 72150937 (-) True LOC110500989
TU1512083 other upstream 720172 72164633 ~ 72168158 (-) True LOC110490626
TU1512124 other upstream 796087 72240548 ~ 72260352 (-) False G1324464

Expression Profile