RNA id: TU1510882



Basic Information


Item Value
RNA id TU1510882
length 346
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G1323526
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71550696 ~ 71551041 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtatTCGTTTAATGGTATTCGTTTAGtggtattagtttagtggtatTCGTTTAATGGTATTAGTTTAGTGGTGTCACATAGTTGTATTAGTTTGAAACATATAGTACAATGTACAGTTGTGTAAATCAATTTGCTCTAGACTTGAAACCATAAGAAGGTTGATGACACTGGATTGTAACTACTAGacatacttacagttgaagtcggaggtttacatacagcttagccaaatacatttaaactcagtttttcacaattcctgacatttaatccaagtaaaaattccctgtcttaggtcagttaggatcaccactttattttaagtgtgtgaaatgtcagaataata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1510880 lncRNA downstream 8905 71541403 ~ 71541791 (-) True G1323524
TU1510868 lncRNA downstream 59598 71490769 ~ 71491098 (-) True G1323512
TU1510867 lncRNA downstream 60354 71490060 ~ 71490342 (-) True G1323511
TU1510855 lncRNA downstream 72320 71478148 ~ 71478376 (-) True G1323506
TU1510808 lncRNA downstream 97270 71453192 ~ 71453426 (-) True G1323470
TU1510887 lncRNA upstream 7101 71558142 ~ 71558477 (-) True G1323531
TU1510907 lncRNA upstream 37919 71588960 ~ 71589188 (-) True G1323549
TU1511045 lncRNA upstream 90192 71641233 ~ 71642332 (-) True G1323665
TU1511076 lncRNA upstream 186775 71737816 ~ 71738162 (-) True G1323688
TU1511113 lncRNA upstream 231481 71782522 ~ 71784574 (-) False G1323712
XM_036945560.1 mRNA downstream 279524 71270357 ~ 71271172 (-) True LOC118938900
XM_036945591.1 mRNA downstream 287114 71247916 ~ 71263582 (-) True LOC118938931
XM_021564168.2 mRNA downstream 312801 71232979 ~ 71237895 (-) True LOC110490709
XM_036945209.1 mRNA downstream 318567 71228868 ~ 71232129 (-) True LOC110490707
XM_021564166.2 mRNA downstream 318568 71228868 ~ 71232128 (-) False LOC110490707
XM_036945225.1 mRNA upstream 136839 71687880 ~ 71734050 (-) False LOC110490714
XM_036945227.1 mRNA upstream 136839 71687880 ~ 71734271 (-) False LOC110490714
XM_036945223.1 mRNA upstream 136839 71687880 ~ 71734313 (-) False LOC110490714
XM_036945228.1 mRNA upstream 136839 71687880 ~ 71734385 (-) False LOC110490714
XM_036945224.1 mRNA upstream 136839 71687880 ~ 71734394 (-) False LOC110490714
TU1510608 other downstream 312850 71202500 ~ 71237846 (-) False G1323296
TU1510607 other downstream 312850 71202740 ~ 71237846 (-) True G1323296
TU1510499 other downstream 511174 71025251 ~ 71039522 (-) True G1323207
TU1510280 other downstream 1005476 70543356 ~ 70545220 (-) True LOC110490645
TU1510302 other downstream 1013557 70536452 ~ 70537139 (-) True G1323036
TU1511211 other upstream 306242 71857283 ~ 71922908 (-) True LOC118938840
TU1512018 other upstream 496923 72047964 ~ 72050171 (-) False LOC110500989
TU1512017 other upstream 506062 72057103 ~ 72150937 (-) True LOC110500989
TU1512083 other upstream 613592 72164633 ~ 72168158 (-) True LOC110490626
TU1512124 other upstream 689507 72240548 ~ 72260352 (-) False G1324464

Expression Profile