RNA id: TU1512155


Basic Information

Item Value
RNA id TU1512155
length 378
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G1324467
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72156594 ~ 72157245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GTGACAGGACTATGCCCTACGTCTTATGAATGAACTGTGTTGTCAAGGGTTACACATAAGAACTAGACCTAATGAGGTAATACAGATGAATGTTTCTGCCTTAGCCACATTCTGACAGTTGTTTCCTGTAATTGGGGGCCAGTGCAAAGGTCAAAGTGTGAAGGTTAACTGATGTCTCTCTCACGTTGTTTTCAAGTCGGAGATGTAACTAATGATTCTGGTCCAGACGGTGCCGCTACACCGCCAGGATCCTAATTAACGGACTCATCAACTGTGAGGGatactgtgtgtgttgtctccTAATGGTGTTCCCTAGCAACCATCTCTCCTCCACAATGTACTGCTGGTGTGCATCCTCATGTTCTCCACATTCTCCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1512147 lncRNA downstream 450 72155251 ~ 72156144 (-) False G1324466
TU1512149 lncRNA downstream 450 72155251 ~ 72156144 (-) False G1324466
TU1512150 lncRNA downstream 450 72155251 ~ 72156144 (-) True G1324466
TU1512120 lncRNA downstream 2081 72154295 ~ 72154513 (-) True G1324463
TU1512118 lncRNA downstream 2737 72153564 ~ 72153857 (-) True G1324461
TU1512157 lncRNA upstream 4106 72161077 ~ 72161395 (-) True G1324469
TU1512080 lncRNA upstream 5839 72162810 ~ 72163645 (-) False LOC110490626
TU1512082 lncRNA upstream 7038 72164009 ~ 72164437 (-) False LOC110490626
TU1512170 lncRNA upstream 24724 72181695 ~ 72182173 (-) True G1324482
TU1512172 lncRNA upstream 36106 72193077 ~ 72193418 (-) True G1324484
XM_036945246.1 mRNA downstream 5598 72027931 ~ 72150996 (-) False LOC110500989
XM_036945241.1 mRNA downstream 5604 72022817 ~ 72150990 (-) False LOC110500989
XM_036945240.1 mRNA downstream 5605 72022817 ~ 72150989 (-) False LOC110500989
XM_036945252.1 mRNA upstream 5690 72162661 ~ 72191307 (-) False LOC110490626
XM_036945251.1 mRNA upstream 5690 72162661 ~ 72192809 (-) False LOC110490626
XM_021576856.2 mRNA upstream 54005 72210976 ~ 72225125 (-) False LOC110499794
XM_021576858.2 mRNA upstream 54005 72210976 ~ 72225125 (-) False LOC110499794
XM_036945255.1 mRNA upstream 54005 72210976 ~ 72225125 (-) False LOC110499794
TU1512017 other downstream 5657 72057103 ~ 72150937 (-) True LOC110500989
TU1512018 other downstream 106423 72047964 ~ 72050171 (-) False LOC110500989
TU1511211 other downstream 233686 71857283 ~ 71922908 (-) True LOC118938840
TU1510608 other downstream 918748 71202500 ~ 71237846 (-) False G1323296
TU1512083 other upstream 7662 72164633 ~ 72168158 (-) True LOC110490626
TU1512124 other upstream 83577 72240548 ~ 72260352 (-) False G1324464
TU1512208 other upstream 178389 72335360 ~ 72336984 (-) False G1324512
TU1512209 other upstream 178389 72335360 ~ 72336984 (-) True G1324512
TU1512282 other upstream 250450 72407421 ~ 72407769 (-) True G1324569

Expression Profile