RNA id: TU1518205


Basic Information

Item Value
RNA id TU1518205
length 355
RNA type TUCP
GC content 0.56
exon number 3
gene id G1328861
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 78870325 ~ 78871031 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CAGGTGTCCATGTTACAGCTGGAGCAGTGGAGCAGGCCAACACCATCAGGTGTCCATGTTACAGCTGGAGCAGTGGAGCAGGCCAACACCATCAGGTGTCCATGTTACAGCTGGAGCAGTAGAGCAGGCCAACACCATCAGGTGTCCATGTTACAGCTGGAGCAGTGGAGCAGGCCAACACCATCAGGTGTCCATGTTACAGCTGGAGCAGTGGAGCAGGCCAACACCATCAGGTGTCCCTGTTACAGCTGAAGCAGTGGAGCAGGCCAACACCATCAGGTGTCCATGTTACAGCTGGAGCAGTGGAGCAAGCCAACACCATCAGGTGTCCATGATACAGCTGGAGCAGTAGAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1518203 lncRNA downstream 4044 78865708 ~ 78866281 (-) True G1328859
TU1518196 lncRNA downstream 13445 78855150 ~ 78856880 (-) True G1328853
TU1518155 lncRNA downstream 28824 78787014 ~ 78841501 (-) False G1328822
TU1518116 lncRNA downstream 39455 78747192 ~ 78830870 (-) False G1328808
TU1518111 lncRNA downstream 39502 78826151 ~ 78830823 (-) False G1328808
TU1518211 lncRNA upstream 8996 78880027 ~ 78881109 (-) True G1328867
TU1518221 lncRNA upstream 27100 78898131 ~ 78898408 (-) True G1328875
TU1518226 lncRNA upstream 32314 78903345 ~ 78903567 (-) True G1328880
TU1518228 lncRNA upstream 40587 78911618 ~ 78911828 (-) True G1328882
TU1518231 lncRNA upstream 43444 78914475 ~ 78914675 (-) True G1328885
XM_036945457.1 mRNA downstream 174544 78677394 ~ 78695781 (-) False LOC118936340
XM_036945566.1 mRNA upstream 7709 78878740 ~ 78918133 (-) True LOC118938905
XM_036945473.1 mRNA upstream 436149 79307180 ~ 79339577 (-) False LOC118938873
XM_036945474.1 mRNA upstream 436149 79307180 ~ 79340005 (-) False LOC118938873
XM_021622541.2 mRNA upstream 615972 79487003 ~ 79489128 (-) True LOC110536863
XR_005036252.1 mRNA upstream 738515 79609546 ~ 79612871 (-) False LOC118938874
TU1518138 other downstream 104277 78763099 ~ 78766048 (-) False G1328815
TU1517636 other downstream 567745 78301668 ~ 78302580 (-) False LOC118938867
TU1517575 other downstream 569470 78298576 ~ 78300855 (-) False LOC118938867
TU1517067 other downstream 995721 77871279 ~ 77874604 (-) True G1328123
TU1516814 other downstream 1363551 77502020 ~ 77506774 (-) True LOC110515635
TU1518240 other upstream 54883 78925914 ~ 78926137 (-) True G1328892
TU1518366 other upstream 158636 79029667 ~ 79030956 (-) True G1328987
TU1518390 other upstream 204259 79075290 ~ 79075536 (-) True G1329004
TU1519010 other upstream 671763 79542794 ~ 79543153 (-) True G1329475
TU1519017 other upstream 696303 79567334 ~ 79567972 (-) False G1329481

Expression Profile