Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1520001 |
| length | 1230 |
| lncRNA type | antisense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G1330143 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 80957850 ~ 80959318 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1519997 | lncRNA | downstream | 2557 | 80954799 ~ 80955293 (-) | True | G1330141 |
| TU1519996 | lncRNA | downstream | 4289 | 80952293 ~ 80953561 (-) | True | G1330140 |
| TU1519977 | lncRNA | downstream | 47993 | 80909546 ~ 80909857 (-) | True | G1330123 |
| TU1519976 | lncRNA | downstream | 48788 | 80908804 ~ 80909062 (-) | True | G1330122 |
| TU1519950 | lncRNA | downstream | 83832 | 80873591 ~ 80874018 (-) | True | G1330103 |
| TU1520005 | lncRNA | upstream | 5635 | 80964953 ~ 80970599 (-) | True | G1330147 |
| TU1520016 | lncRNA | upstream | 21134 | 80980452 ~ 80982314 (-) | False | G1330155 |
| TU1520015 | lncRNA | upstream | 22477 | 80981795 ~ 80982314 (-) | True | G1330155 |
| TU1520018 | lncRNA | upstream | 28950 | 80988268 ~ 80989878 (-) | True | G1330157 |
| TU1520028 | lncRNA | upstream | 43591 | 81002909 ~ 81003303 (-) | False | G1330166 |
| XM_036945567.1 | mRNA | downstream | 566109 | 80370567 ~ 80391741 (-) | False | LOC118936542 |
| XR_002472471.2 | mRNA | downstream | 587359 | 80369309 ~ 80370491 (-) | False | LOC110516866 |
| XR_005036285.1 | mRNA | downstream | 609963 | 80286961 ~ 80347887 (-) | False | LOC110516867 |
| XM_036945521.1 | mRNA | upstream | 157878 | 81117196 ~ 81119754 (-) | False | LOC110515349 |
| XR_005036293.1 | mRNA | upstream | 157878 | 81117196 ~ 81119754 (-) | False | LOC110515349 |
| XR_005036294.1 | mRNA | upstream | 239004 | 81198322 ~ 81198931 (-) | False | LOC118938883 |
| XR_005036295.1 | mRNA | upstream | 239004 | 81198322 ~ 81198977 (-) | False | LOC118938883 |
| XR_005036296.1 | mRNA | upstream | 382596 | 81341914 ~ 81343353 (-) | True | LOC118938884 |
| TU1519998 | other | downstream | 60 | 80955531 ~ 80957790 (-) | False | G1330142 |
| TU1519999 | other | downstream | 60 | 80955531 ~ 80957790 (-) | True | G1330142 |
| TU1519955 | other | downstream | 78447 | 80878820 ~ 80879403 (-) | False | G1330106 |
| TU1519954 | other | downstream | 78447 | 80879000 ~ 80879403 (-) | True | G1330106 |
| TU1519627 | other | downstream | 405365 | 80552234 ~ 80552485 (-) | True | G1329894 |
| TU1520033 | other | upstream | 45554 | 81004872 ~ 81006072 (-) | True | G1330168 |
| TU1520239 | other | upstream | 157882 | 81117200 ~ 81119722 (-) | False | LOC110515349 |
| TU1520240 | other | upstream | 157882 | 81117200 ~ 81119722 (-) | True | LOC110515349 |
| TU1520293 | other | upstream | 237506 | 81196824 ~ 81199165 (-) | False | LOC118938883 |
| TU1520291 | other | upstream | 238442 | 81197760 ~ 81199165 (-) | False | LOC118938883 |
