RNA id: trnah-gug-6


Basic Information

Item Value
RNA id trnah-gug-6
length 72
RNA type mRNA
GC content 0.58
exon number 1
gene id trnah-gug-6
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 2944989 ~ 2945060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gccgtgatcgtatagtggttagtactctgcgttgtggccgcagcaaccccggttcgaatccgggtcacggca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1523177 lncRNA upstream 62077 2881751 ~ 2882912 (+) True G1332688
TU1523180 lncRNA upstream 63311 2881251 ~ 2881678 (+) True G1332691
TU1523166 lncRNA upstream 109172 2835477 ~ 2835817 (+) True G1332677
TU1523163 lncRNA upstream 111299 2833476 ~ 2833690 (+) True G1332674
TU1523162 lncRNA upstream 115526 2829199 ~ 2829463 (+) True G1332673
TU1523201 lncRNA downstream 20860 2965920 ~ 2966250 (+) True G1332711
TU1523190 lncRNA downstream 25085 2970145 ~ 2970796 (+) True G1332700
TU1523188 lncRNA downstream 27388 2972448 ~ 2972727 (+) True G1332699
TU1523233 lncRNA downstream 61137 3006197 ~ 3050949 (+) False G1332727
TU1523235 lncRNA downstream 61137 3006197 ~ 3007055 (+) False G1332727
XM_036945964.1 mRNA upstream 5049 2931169 ~ 2939940 (+) False LOC110491239
XM_021564587.2 mRNA upstream 5049 2931177 ~ 2939940 (+) False LOC110491239
XM_036945954.1 mRNA upstream 313834 2580293 ~ 2631155 (+) False LOC110535007
XM_036945949.1 mRNA upstream 373230 2295839 ~ 2571759 (+) False heatr5b
XM_036945965.1 mRNA downstream 352 2945412 ~ 2969606 (+) True memo1
XM_036945969.1 mRNA downstream 44143 2989203 ~ 3053488 (+) False LOC110492798
XM_036945970.1 mRNA downstream 44143 2989203 ~ 3053488 (+) False LOC110492798
XM_036945973.1 mRNA downstream 120005 3065065 ~ 3201726 (+) False LOC110492796
XM_036945975.1 mRNA downstream 120005 3065065 ~ 3201726 (+) False LOC110492796
TU1523176 other upstream 5049 2931220 ~ 2939940 (+) True LOC110491239
TU1522971 other upstream 635422 2295856 ~ 2309567 (+) True heatr5b
TU1522653 other upstream 1013857 1930754 ~ 1931132 (+) True G1332261
TU1522652 other upstream 1014516 1929324 ~ 1930473 (+) True G1332260
TU1521866 other upstream 1505864 1438787 ~ 1439125 (+) True G1331652
TU1523191 other downstream 27748 2972808 ~ 2973800 (+) True G1332701
TU1523257 other downstream 120258 3065318 ~ 3197251 (+) False LOC110492796
TU1523349 other downstream 285139 3230199 ~ 3231407 (+) False G1332826
TU1523350 other downstream 285139 3230199 ~ 3231014 (+) True G1332826
TU1524854 other downstream 1394778 4339838 ~ 4340868 (+) True G1333963