Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1540321 |
| length | 434 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC110491465 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17158314 ~ 17212112 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1540226 | lncRNA | downstream | 57631 | 17099498 ~ 17100720 (-) | True | G1347269 |
| TU1540196 | lncRNA | downstream | 91464 | 17065750 ~ 17066887 (-) | True | G1347244 |
| TU1540134 | lncRNA | downstream | 111851 | 16989972 ~ 17046500 (-) | True | G1347183 |
| TU1540099 | lncRNA | downstream | 209005 | 16949026 ~ 16949346 (-) | True | G1347148 |
| TU1539997 | lncRNA | downstream | 231938 | 16924522 ~ 16926413 (-) | False | G1347067 |
| TU1540323 | lncRNA | upstream | 92 | 17160189 ~ 17160397 (-) | True | G1347348 |
| TU1540316 | lncRNA | upstream | 2681 | 17162778 ~ 17212112 (-) | True | LOC110491465 |
| TU1540334 | lncRNA | upstream | 26793 | 17186890 ~ 17194727 (-) | True | G1347357 |
| TU1540320 | lncRNA | upstream | 47048 | 17207145 ~ 17230708 (-) | True | G1347345 |
| TU1540561 | lncRNA | upstream | 127898 | 17287995 ~ 17293635 (-) | True | G1347556 |
| XM_021564924.2 | mRNA | downstream | 425247 | 16728503 ~ 16733104 (-) | True | LOC110491457 |
| XM_021564925.2 | mRNA | downstream | 425346 | 16728503 ~ 16733005 (-) | False | LOC110491457 |
| XM_021564926.2 | mRNA | downstream | 433372 | 16695214 ~ 16724979 (-) | False | LOC110491459 |
| XM_036946309.1 | mRNA | downstream | 433372 | 16695214 ~ 16724979 (-) | True | LOC110491459 |
| XM_021564922.2 | mRNA | downstream | 476787 | 16653966 ~ 16681564 (-) | True | lmf1 |
| XM_036946352.1 | mRNA | upstream | 145961 | 17306058 ~ 17352385 (-) | False | LOC110491470 |
| XM_036946353.1 | mRNA | upstream | 146500 | 17306597 ~ 17352385 (-) | False | LOC110491470 |
| XM_036946354.1 | mRNA | upstream | 146500 | 17306597 ~ 17352385 (-) | False | LOC110491470 |
| XM_036946358.1 | mRNA | upstream | 146500 | 17306597 ~ 17352385 (-) | False | LOC110491470 |
| XM_036946356.1 | mRNA | upstream | 146648 | 17306745 ~ 17352385 (-) | False | LOC110491470 |
| TU1539993 | other | downstream | 228919 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1539994 | other | downstream | 228919 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1539999 | other | downstream | 228919 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1540000 | other | downstream | 228919 | 16924522 ~ 16929432 (-) | True | G1347067 |
| TU1538336 | other | downstream | 1459088 | 15698985 ~ 15699263 (-) | True | G1345561 |
| TU1540318 | other | upstream | 35233 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1540612 | other | upstream | 229288 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1541907 | other | upstream | 1257518 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1542585 | other | upstream | 1473934 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 2160773 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
