Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1542506 |
| length | 235 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC110491505 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18525206 ~ 18550690 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1542009 | lncRNA | downstream | 3796 | 18524179 ~ 18524379 (-) | True | hoxb1b |
| TU1541994 | lncRNA | downstream | 13461 | 18514478 ~ 18514714 (-) | True | G1348858 |
| TU1541908 | lncRNA | downstream | 136007 | 18390771 ~ 18392168 (-) | True | G1348778 |
| TU1541935 | lncRNA | downstream | 137652 | 18390246 ~ 18390523 (-) | True | G1348804 |
| TU1541931 | lncRNA | downstream | 147763 | 18379533 ~ 18380412 (-) | True | G1348800 |
| TU1542508 | lncRNA | upstream | 1122 | 18529531 ~ 18529762 (-) | True | LOC110491505 |
| TU1542517 | lncRNA | upstream | 5145 | 18533554 ~ 18533859 (-) | True | G1349314 |
| TU1542520 | lncRNA | upstream | 9667 | 18538076 ~ 18538335 (-) | True | G1349317 |
| TU1542544 | lncRNA | upstream | 25539 | 18553948 ~ 18554545 (-) | False | ttll6 |
| TU1542547 | lncRNA | upstream | 28313 | 18556722 ~ 18557003 (-) | True | G1349329 |
| XM_021565005.2 | mRNA | downstream | 3130 | 18522453 ~ 18525045 (-) | False | hoxb1b |
| XM_021564996.2 | mRNA | downstream | 15762 | 18477077 ~ 18512413 (-) | False | LOC110491502 |
| XM_021564995.2 | mRNA | downstream | 15763 | 18477670 ~ 18512412 (-) | True | LOC110491502 |
| XM_036946374.1 | mRNA | downstream | 70654 | 18447916 ~ 18457521 (-) | True | cbx1b |
| XM_021565000.2 | mRNA | downstream | 70655 | 18447916 ~ 18457520 (-) | False | cbx1b |
| XM_021565006.2 | mRNA | upstream | 12839 | 18541248 ~ 18543472 (-) | True | LOC110491507 |
| XM_021565007.2 | mRNA | upstream | 15555 | 18543964 ~ 18546172 (-) | True | LOC110491508 |
| XM_036945852.1 | mRNA | upstream | 22786 | 18551195 ~ 18552971 (-) | True | LOC110492883 |
| XM_021565008.2 | mRNA | upstream | 24767 | 18553176 ~ 18575510 (-) | False | ttll6 |
| XM_021565011.2 | mRNA | upstream | 24767 | 18553176 ~ 18575510 (-) | False | ttll6 |
| TU1541907 | other | downstream | 104989 | 18417615 ~ 18423186 (-) | True | prr15lb |
| TU1540612 | other | downstream | 1136221 | 17389385 ~ 17391954 (-) | True | LOC110491477 |
| TU1540318 | other | downstream | 1332046 | 17195330 ~ 17196129 (-) | True | G1347343 |
| TU1539999 | other | downstream | 1598743 | 16924522 ~ 16929432 (-) | False | G1347067 |
| TU1542585 | other | upstream | 105622 | 18634031 ~ 18634405 (-) | True | G1349366 |
| TU1542973 | other | upstream | 792461 | 19320870 ~ 19325054 (-) | True | LOC110491541 |
| TU1543183 | other | upstream | 932632 | 19461041 ~ 19461815 (-) | True | G1349896 |
| TU1543843 | other | upstream | 1163283 | 19691692 ~ 19697658 (-) | True | LOC110491553 |
| TU1545321 | other | upstream | 1801991 | 20330400 ~ 20333729 (-) | True | LOC110491567 |
