Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1543640 |
| length | 239 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 1 |
| gene id | csf3a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 20082539 ~ 20085438 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1543638 | lncRNA | upstream | 2723 | 20079457 ~ 20079816 (+) | True | G1350297 |
| TU1543635 | lncRNA | upstream | 6775 | 20075493 ~ 20075764 (+) | True | G1350294 |
| TU1543616 | lncRNA | upstream | 28462 | 20049079 ~ 20054077 (+) | True | G1350276 |
| TU1543444 | lncRNA | upstream | 275434 | 19806255 ~ 19807105 (+) | True | G1350110 |
| TU1543411 | lncRNA | upstream | 317307 | 19759658 ~ 19765232 (+) | True | G1350077 |
| TU1543641 | lncRNA | downstream | 3779 | 20086556 ~ 20086846 (+) | True | G1350300 |
| TU1543644 | lncRNA | downstream | 6972 | 20089749 ~ 20090153 (+) | True | G1350303 |
| TU1543660 | lncRNA | downstream | 32741 | 20115518 ~ 20115774 (+) | True | G1350316 |
| TU1544204 | lncRNA | downstream | 113161 | 20195938 ~ 20196411 (+) | True | G1350764 |
| TU1544254 | lncRNA | downstream | 157309 | 20240086 ~ 20240294 (+) | True | G1350808 |
| XM_021565104.2 | mRNA | upstream | 8980 | 20059264 ~ 20073559 (+) | False | lrrc3ca |
| XM_036946450.1 | mRNA | upstream | 8980 | 20071942 ~ 20073559 (+) | True | lrrc3ca |
| XM_021565083.2 | mRNA | upstream | 453419 | 19624195 ~ 19629120 (+) | False | LOC110491550 |
| XM_021565084.2 | mRNA | upstream | 453419 | 19624244 ~ 19629120 (+) | True | LOC110491550 |
| XM_036946429.1 | mRNA | upstream | 459010 | 19620544 ~ 19623529 (+) | True | LOC110491549 |
| LOC118939518 | mRNA | downstream | 25296 | 20108073 ~ 20109188 (+) | True | LOC118939518 |
| XM_036946454.1 | mRNA | downstream | 151227 | 20234004 ~ 20282891 (+) | True | dnah3 |
| XM_021565115.2 | mRNA | downstream | 207456 | 20290233 ~ 20300355 (+) | False | dcun1d3 |
| XM_036946456.1 | mRNA | downstream | 207522 | 20290299 ~ 20300355 (+) | False | dcun1d3 |
| XM_021565114.2 | mRNA | downstream | 207745 | 20290522 ~ 20300355 (+) | False | dcun1d3 |
| TU1543613 | other | upstream | 44561 | 20030730 ~ 20037978 (+) | True | G1350275 |
| TU1543395 | other | upstream | 344505 | 19737162 ~ 19738034 (+) | True | G1350066 |
| TU1542335 | other | upstream | 940862 | 19139027 ~ 19141677 (+) | True | LOC110491534 |
| TU1542100 | other | upstream | 1322119 | 18752623 ~ 18760420 (+) | False | LOC110491516 |
| TU1542039 | other | upstream | 1527087 | 18555177 ~ 18555452 (+) | True | G1348897 |
| TU1544755 | other | downstream | 1137988 | 21220765 ~ 21221147 (+) | True | G1351274 |
| TU1544874 | other | downstream | 1319450 | 21402227 ~ 21405117 (+) | True | G1351366 |
| TU1545030 | other | downstream | 1596447 | 21679224 ~ 21680881 (+) | True | G1351501 |
| TU1545079 | other | downstream | 1916580 | 21999357 ~ 22000251 (+) | False | LOC110491629 |
| TU1546739 | other | downstream | 2549102 | 22631879 ~ 22632305 (+) | True | G1353021 |
