RNA id: XM_021565106.2


Basic Information

Item Value
RNA id XM_021565106.2
length 7673
RNA type mRNA
GC content 0.44
exon number 2
gene id kcnj12a
representative True

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 20153681 ~ 20167642 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtgagagaaaaagagagcgagagagagaactgctGCCAGCAGAACTAGATCAGGTTGCAAATATTGATAGAGAGGCTGTTCAGCTAATAAGCAGAGGTAATTATCTCTTTTAATTCAACATTTTTATGGGAAATGTGACAAAGGACTTCAATGTTACTAAAGGTTGTCAATGAACACAAGTGCTGAGGGAGTTCAGAAGATGGGGATACAAAGCCTTTTTTCACATTGGGAAATTGTTAGATACCTTTGTTTACGCCCAGCAACGGAGGACAAACTGTGGACAGAGTGATTCAGTCAAAGAGaagaaaatacacacatttgTCATGGTTTTGTTCTTTGTGGGGACCAATTGACCACAGTTGCATTGCACGTATGTGCGATGTATGTAGGAAGAACTCGCTGACTGACAACAACAGAGGAAGGAAAGATAGCAGATATAGAGCTCAATGATGAAGAAATTCAAAGGGTTTCTGTGTCTGTGGCTCAAAAGGATGGAGTGGTTCTACCCTTAGGAATCACAGAGGGAGAGACCAGCTCTGGTGGCTTAAACTCGGAGGGAGAATGATGCTTCAGATTGGTTAGCTGGGATATGAGCCAGGAGGACACTGTGTTTCAGCTCTAAAGTGGGGTAGAAGAAGAACCAGGTGGATAATATAAGggaGTGGTCGGCCGAGAGTACAACAACCCACACAGCACACCTTCTCCCTGGCTATGACCGGCTGAGATGGGGCTCTGGCAGTGACACCACTGGAAAGGACCTCTGAGTGATCACACATTGGGACATCCGGGACCTCCCACCTACTCCCGACCCTGCAGCCCGGGCCTACGTGGCCAGCATGAGTGTGGGTCGTCTCAACCGTTACAGCATTGTGTCATCCGAGGAGGAGGCGCTGCGGCTCACCAACATGCACGGTGGCAGCAGTGGTGGAATGAATGGCTTTGGCAACGGCAAAATCCACACACGCCGCAAGGTCCGCAACCGCTTCGTCAAGAAGAATGGCCAGTGCAATGTGCAGTTCGCAAACATGGAGGACAAGTCATCGCGCTACATGGCCGATATGTTCACCACGTGCGTGGACATCCGTTGGCGCTACATGCTGGTGCTGTTCACGCTGGTGTTCGTGCTGTCTTGGCTGGCCTTTGGCCTGGCCTTCTGGGTCATAGCGTTACTCCACGGCGACCTTGACAACCCGGCCGGAGACGACAACTTCACGCCCTGCGTTCTGCAAGTCAACGGCTTTGTGGCCGCCTTCCTGTTCTCCATCGAAACCCAGTCAACCATCGGCTACGGCTACCGCTGCGTGACGGAGGAGTGTCCCGTCGCAGTCTTCATGGTGGTCTTCCAGTCGATCGTGGGCTGCATCATTGACTGCTTCATGATTGGCGCCATCATGGCCAAGATGGCACGGCCCAAGAAGCGGGCACAGACGCTGCTGTTCAGCCACAACGCAGTGATCGCCATGCGCGACAGCAAGCTGTGCCTCATGTGGAGGGTGGGGAACCTGAGGAAGAGTCACATTGTAGAGGCCCATGTCAGAGCTCAGCTCATCAAACCCCGGATCACTGACGAAGGGGAGTACATCCCCTTGGACCAAATAGACATCAATGTGGGCTTTGACAAAGGCCTGGACAGGATTTTCTTGGTGTCGCCCATTACGATTATCCATGAGATCGATGAGGATAGTCCACTCTATGGGATTGGTAAAAATGACCTGGAGACGGCAGACTTTGAGATCGTGGTCATACTGGAGGGAATGGTCGAGGCGACTGCCATGACCACACAGGCGCGCAGCTCCTACCTGGCCACGGAGGTGCTGTGGGGTCACCGGTTCGAGCCGGTGCTCTTCGAGGAGAAGAACCTGTACAAGGTGGATTACTCTCACTTTCACAAGACCTACGAGGTACCGTCCACCCCGCGCTACAGTGCCAAGGACATGGTGGAGAACAAATTCCTGGTGCCCACCTCCAACTCCTTCTGTTACGAGAATGAGCTGGCCTTTCTCAGCCGGGACGAGGACGAGGAAGAGGATGTGGTGGGCGTGGGCGTGGGCGGTGGTGTCAGAGTGCTGGCCAACCTGAACAGTCCGGACCGGACCAGTCGACACGAGTTCGAGAGGATACAGACCACTAGGGGACTGGACCAAAGGTCGTACCGCAGGGAGTCAGAGATATGACCCCTGCCCTTGTACCTACCCGGGGTCAACATTTGATACGTTTTCTTTCCTTCCAAGGGTAAAACTGCAGAACAATGCAAAGTGCCATAGGAAAAGCTGACTACTGTAATAGGTTGGAAAGAAAATAAGGGGACagtgaaagggaaagagggatactGTTTGGAAGGAATAGGTGAAAGCTAGAGTACGCAGCTCGCAAAACTGTGGTAGAGAACGTCGTCAACAAAAGGAAAAGGCCTGTGAAGGACCTTATTCCTTCATGGAAACTTGaatatttttttcacaatgtcattTGAGTTTCAATGATGCATCGAACAGGTATAATGACAAGACCTAATAATCCGATACTAGGTGTTCATATTATTGCTTAGATAAGTTGTTTTGTGTGGAGTACCGTTTTTCAACATATTTTTGCTATTTCAACTTGCTGTTGGGCACAAATGATAGTGTTACAGTTTAAAGCTACCCATACGCTTCCCACATTGCTGGAATTCCCAATCGCTGTAACGGAGTTACGAAAATTCCTGTAAAAGTGTACTGCAGCATTCAGAAGCAATGAACCATGCTAAATCATTTAACCATCCACGAGCCATTGAAGCACAACGTAGTTTCACAACTTGAATTTGAACCAGTTGTGATGAATACATATAATTTGCACTATTAGCCCAATAGTAATGCAGTAAATGAATTTAGAATGGGCAGGGGTGAACATCTCAAAATTCTCTAGAAAGAAAATAAATTGAATTGATCATTTTGATACCGCCTTGCTTAAAACAGAAAAATAACACAGGATTATTCTGACCTCAACGAAGTTTGAAACAACTATAGGGAAAATATCattacgtttcttttttttctctctttctctcttttttattCTCTTTAAAACAAATCTATGCACATCATTAATGATATCAAGGGGACAGAAACTGAATGGATTTCCGTAGAAGATGCTATGATGTCGTCCAATCACCATCGCATAATTCTACAAAGGGAACCGGTTTGATGAATGTGTGTCTGAACTCAATGAGGATTGAGGGCCTTCACATGTATAAAGTGTTTCCCCTCTAATATCTTTATAAGTAAAGAGCAGTTATTGTATGCTATCAAATCCCCTTTGATAGAAAAGTTCAAATAGTATGCAGAAAGAATGGTACTTTACCAGGTTAATTCATGTGTGTTAAAGGAATACTCCACTCATGATGATGGTGTAAGTGACAATTTGCTTTTTGAAAGTCCTACATCTTGAAAACTTGCTGACATTTTCGGACTATATCGACAATGGACTTatgaaaaaaaatactaaatatagTTTAAAATAGTGTATTATTCCTTCAAGCTTTGCTTTGCTGGAAAACTGTCATCAATATTTTCCTAATGGTCTACACAGGGTATGCATGTGGGGCAGGGTTAAAATTTGTAAAATGATTAATCCCATGGTTTTAGAAACATACTGTAAGAGCAAGCTATTAACCCCTATTAAGCACGAGAAACTATCTGTGATATGTTGAAAAAAGTCCTTAGTTGATTTGATTCAATTACATCTCAGAAGCAATAGGCTTACATGATCAGGTGGACAGACAATATGAAAAGCAATAATACTGAAATGTACCTCCATGTTATGTACTAAACATAAATGGTGAATGGCACAGAGCTAAATTTGGCTATCATGAGTCTATTTGTGGAACCCGGTTGGCTAGTCTGGTGACTCCATTCTCTCGTGGTGCACCTGTTTTATAACTGGCACCACACTTATCTCTCTGACAGTGATGTTTTGAGTCTCGAGGAGCGCTTTCACCAAAACATAATGTATCATAATGTATCTTTCGTCCTTCATTTACTGGAGTGATCTTCAAAGTTCAATAACTCAAGAAGTAGCTGAGCAGCTGAGTTAAGTTGGGTTCGGAACAacattatatacattatattAAGAATGAGTACAATAACAAAAATTATTTGTAAGGTGTGTTGCTATGATATGGAAGCCTAAAGGTACCAAAACTCAATTTAAAATGCAAATTGGAATGGAAGTAACAAAAGGAGTCATAAATAGGAAAGGTGTCTTGAATGTTAATAATCTAGGTTCAACTTCAAGCACAAAATCAAGCAAAAAAATTCTAAATTCAAAACaaataaatgtcatattttagTATCTACAGATTTGTTTTTGTCTTAGTTACATATACTGAGTAGTTTGTAATTTATCAGTATCTAGGTAAAGCAAGAAAACTAAGGTGCATGACAGACTAATTTTAATCTTTGGCATGAATCGTAGCATATGAAATGTATACCTTGAATTTATGCCTACCCATAATGCACTGCTCTACTAAATAGCACACAATATATTATGCTGTGTCATGAAATCATTGAAATCCTCATTGAAATGTGCAGTTCATGTCCCCTAAAATACTActtttcctcttccaccaaaaTAACTGCCCTTGTATCTAAGAAAGGGGGAAGTAGGAGGTATAGTACTGTAAGACTAGCACAAGAAGAAACACCATGATGGTCATTCAGCTGGCGACAATGACTGATATTTTCCTAGTGGTCCTTTTATCCCAGGGGTATCCTTTGCCCTAAATAATTATACATAATGTGTTGCTTTTTAGAACTTTTAGGCTACGAGAGATTTTTGGGGAGATGAATGAAGCCTTTTTGTCCCAATCCTAGACTTTATGCTCATTGCCTTCTGGGAAGGCTCTGGTATCCTAATGTGTGACACCTTTGTACCTACTTATAATGTTTTGGTGGTATCCATGGTAAAGCATCATCAGCTTCTATGCTGCATCATCGGAATGCAAAATTCCATCATGCCTTTTTCTTTTTTATCGGAAGAAGTTTTAATATTACCCAACCTGGCTCCATGAAACAGATAATGCACTAGCTGTACACAACATCAATAAACTATATTGGGCAACAGCTAAATACACACAAATCAACACATCTGTTTTAAAAGTAAGTTATTTTTAAATGACAGTATTTCATTGAGATACATTAGAATAAAATCATCCATATTTATCGATTTTTGTACCAGAAGAAAATCTGAAGAAATCACAAAGAAAGAGGCAAAAAATTGATTTATTGCCTCAGGTTATCAATGATTTGATTTTGTTTCATTTCAGCACAGAAGCTTGTGATTAAACAGGTATTTCTCTTAAAGGGATGATTGGAAAACCTTTGACCTCTGTAGAAGTCTTCCTATGGCCCAGGTGAAGAAACGTGCCCTGGGCTTTTATTTTAATGCAAAGTCAATTAAATTATTCAATTAAAACCTAATTGTAAATGAAAACTGGTTGGAGTGCATATTTTGTTAAATTTGCTTACTTCATGTATTTATCGTTGTAAAACTGAAAACATTGGTATTACATTACAGTAGTAGCCCACAACACAACAGCTGCTGTGAATTAACGTAATATTCCAGCATTTTGTTTCTCCCACCTAGCAAATTTCTGTGTTGCGAATCAACTCTAAACACAGGTGGTACTCATAAGGCCTGACTAATCAATCGACCAACTAACAGAGAGCTGTATCATGATGACAAATGTGATCAGACTGAGATCACAGATCAACATCTGTGTTGCCGAGGTGACCAGATGCCTCTCTGGTCTATGGACAATTATTCGATCCAGTCGTTCAATAAATCACTGTGacatacactcacacaaacaGCCTGGCgggttcaggagccttttgggaCCCTATGGACCAGAACTGGAGGACAACCAGAcacaggtgtagagagagagatcaatggAGGAAACAACTAGATGCATCATCATTACTCTACTGACAAAATAATGGAGAAAATGTTGGTTATATTTCTAATACTCGTTTCAATGTCTCACTTCTGGGATTCTATCTAGCAGATCACTAACTTGACAAACCAATCACACAACgtctgttggagacagacaggttgcgTGGCAAATGAGATGAGCCCCTCCCCTCTTTATAAGGTACCACTCGCCCAATTGTTCTCAGGCAAACCGTGAGGTTAGCGCTGCCAAACGTAGGACCTCAGCTCCTGTCGATAGTGTTGAGTACTGACCAAAAGGAAAGTTTTGCTTAGAGTACAATTTATTTGGAAGCTAGCGTCACACGGCTAGCTATCAAGACTTGGTTAGCCCACGCCGCAAGGCTTTAGCTAACTTGGCTAGCTAGCTGGAAAGCTAGTTAACCACCCTCAAAGGGCTCTTGCTGCATGGCCAGATCAACCCACGTTCACCCGTGCCAAGTTGATTAAACTGACTACCCTAGATTTACAGCTCGACGGTCGAGAGACACACTTTGTTTGTCGAGgcacaaagaacacacacactttctccagCTAGCATTGTGCTATCTAGTTAGGCTGTTAGCCGAAAGGCGAGGAAAACTATTTTCTTGAGGAAAACTATTTTCTCTGAGCCATGGAGCCTTCTACCCCTTCACAGGGAGAACCAAGCAGGACTCTTGCCCCACTACTGTCACACTTGTATCCGTGTGGGGCTATGCTATCAGGCAAGGACACACACTCTTTGTGTATCATCTGCCTGGGGGCAGAGCATGCTGAAGCATCACTCGGTAATCCCTAGTCCTGTGTGCACTGTAGGGACTTTCATAAGCCCGCCCTTAAGCCAAGACTGCATAGATCAAACCCTTCACGGGCCCCATCGTCCTCACAGCCTGCGGGTGAGGAGGCTACCCCGCAACTTCAACCCTCATGGGCTGAGGTAGAGGAGGCTTACCCGAGGACCTCCAACCATTGTTTGATTACTCTACAGtggaggaaggagaaggggacCTCATCATCAATGAGTTCGATAGGACTGGCCTTCGATACCCGATGACCGATTCAGGCTTATCAATGTCTGCAGACTGGCAGTGGCACACACCCGTGGGGGGTGGCAGTGCAAAAGTGGATTGACACGACAGGAGGAGTCTCCCCTCTTATACCGTCCCAGGAAATACACTTCTCCCAGCTGTCCCAGCTTGCGTGGAGGAAGCCAAGCGCAACTGGGGCAAGCCCTTGTCCACTAAAGTCCAGACCAGGACATCCCTTGGTAGTTGAGCAGTCGCTGGCCAACCACACCAACCCCAGTGCAACGTCACAGACCGGCCCTTTTCTGAATCTATATTCAAGAAGAACATAATGTCCCTACTGTTGGCTTATCAGGCAGATTTGCCGCTGGTACTGCCAAACAGGACCTATGAGAGGAGATCTGCGTCATTGCCGATCTTAACGTCTGTGCCTCCAGAGGACGTGTCATGAGCCTTGCTGTGGTGGCGGAGAGTGCCCTGCAAGTGTGGGAACGTCTCTCATCTCATTGGATAGCGGAGGCTATTATATTTGCTTATAATAGCAAGGGTTTACAGCCCTGGAGGGACTGAAGGCTCATTCCACCAGAGGTGGGCAATGTTCaaagtagaggttgaccgattaatcggaatggtcgattaattagggccgatttcaagttttcataacaatcggtaatcggcatttttggacaccga

Function

GO: NA

KEGG:

id description
K05005 KCNJ12_18, KIR2.2, KIR2.6; potassium inwardly-rectifying channel subfamily J member 12/18

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1544119 lncRNA downstream 39994 20090495 ~ 20113687 (-) True med24
TU1544137 lncRNA downstream 96864 20056575 ~ 20056817 (-) True G1350698
TU1544070 lncRNA downstream 116844 19952226 ~ 20036837 (-) True G1350633
TU1544103 lncRNA downstream 146113 20007044 ~ 20007568 (-) True G1350665
TU1544066 lncRNA downstream 147441 19945351 ~ 20006240 (-) True G1350629
TU1544201 lncRNA upstream 26079 20193721 ~ 20193923 (-) True G1350761
TU1545308 lncRNA upstream 71233 20238875 ~ 20239098 (-) True G1351772
TU1545309 lncRNA upstream 73169 20240811 ~ 20241017 (-) True G1351773
TU1545316 lncRNA upstream 87097 20254739 ~ 20254948 (-) True G1351780
TU1545319 lncRNA upstream 92185 20259827 ~ 20260056 (-) True G1351783
XR_005036470.1 mRNA downstream 29147 20083758 ~ 20124534 (-) False med24
XR_005036466.1 mRNA downstream 29150 20083758 ~ 20124531 (-) False med24
XR_005036463.1 mRNA downstream 29151 20083758 ~ 20124530 (-) False med24
XR_005036465.1 mRNA downstream 29151 20083758 ~ 20124530 (-) False med24
XR_005036467.1 mRNA downstream 29151 20083758 ~ 20124530 (-) False med24
LOC110491568 mRNA upstream 118167 20285809 ~ 20286964 (-) True LOC110491568
XM_021565116.1 mRNA upstream 162763 20330405 ~ 20334029 (-) False LOC110491567
XM_021565119.2 mRNA upstream 171467 20339109 ~ 20346615 (-) False fam234a
XM_021565120.2 mRNA upstream 171467 20339109 ~ 20346645 (-) False fam234a
XM_036946457.1 mRNA upstream 171467 20339109 ~ 20347491 (-) True fam234a
TU1543843 other downstream 456023 19691692 ~ 19697658 (-) True LOC110491553
TU1543183 other downstream 691866 19461041 ~ 19461815 (-) True G1349896
TU1542973 other downstream 828627 19320870 ~ 19325054 (-) True LOC110491541
TU1542585 other downstream 1519276 18634031 ~ 18634405 (-) True G1349366
TU1541907 other downstream 1730495 18417615 ~ 18423186 (-) True prr15lb
TU1545321 other upstream 162758 20330400 ~ 20333729 (-) True LOC110491567
TU1545473 other upstream 472584 20640226 ~ 20646198 (-) True LOC110491585
TU1545462 other upstream 653057 20820699 ~ 20823122 (-) False h3f3d
TU1545463 other upstream 653057 20820699 ~ 20823122 (-) True h3f3d
TU1545802 other upstream 1041821 21209463 ~ 21210794 (-) True G1352220

Expression Profile